Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0729 ATGGCTACTACCGCTTCTGCTTCGTTCGCTCGCTTCTCCGTCATTTCGAGACTTTCAACGTCCAATTCACAGTTCATCCTCTTCAATGTCGCTCCTCAAACCAGAGCCCCTCATTCGAGAACCGGTTCGGGGCGGTTCAGGTGCTCGGCCGGGCAGACCGGGTTCTTCTCGAAACTGGGGCGGTTGATAAAGGAGAAGGCGAAGAGTGACGTGGAGAAGCTCTTCTCGGGATTCTCCAAGACTCGCAGCAACCTTGCCGTCATCGATGAGCTTCTCCTCTATTGGAACCTCGCCGACACCGACCGTGTCCTCGACGAACTCGAAGAGGCTCTTTTAGTGTCTGATTTTGGGCCAAGAATCACTATTAAGATAGTGGAAAATCTGCGCGAGGATATATTTTCAGGGAAGCTTAAATCAGGGAATGAGATAAAGGAAGCACTGAAGAGGAATGTTTTGGATTTGTTAACCTCCAAGGGGAGTAAAACTGAACTTCAACTTGGATTCAGGAAGCCAGCTGTAATAATGATAGTTGGTGTTAATGGTGGAGGGAAGACTACATCTTTGGGAAAGCTGGCCTATAGATTGAAGAATGAAGGGGCTAAGATATTGATGGCAGCTGGTGATACATTTAGAGCAGCTGCTAGTGATCAGTTGGAAATATGGGCTGAAAGGACTGGGTGTGAGATTGTTGTGGCTGAATCAGAGAAAGCGAAAGCATCATCCGTGCTTTCACAGGCTGTAAAAAAGGGAAAAGAGCTAGGTTTTGATATTGTATTGTGTGATACATCTGGGCGTTTACACACTAATTACAGCCTAATGGAAGAGTTGATTTCCTGTAAAAGGTCTGTTGCTAAAGTCGTTGCCGGTGCACCTAACGAGATCCTACTGGTTCTGGATGGGACTACCGGTTTGAATATGTTGCCACAAGCAAGAGAATTCAATGATGTTGTGGGTGTTACTGGTTTAATTTTGACCAAACTGGATGGTTCTGCCAGAGGTGGCTGTGTGGTCAGCGTGGTTGATGAGCTTGGAATCCCTGTAAAATTTGTGGGTGTAGGCGAAGGTGTTGAAGACCTTCAACCCTTTGATGCAGATGCCTTTGTCAATGCCATTTTTATGTAA 1122 0.4643 MATTASASFARFSVISRLSTSNSQFILFNVAPQTRAPHSRTGSGRFRCSAGQTGFFSKLGRLIKEKAKSDVEKLFSGFSKTRSNLAVIDELLLYWNLADTDRVLDELEEALLVSDFGPRITIKIVENLREDIFSGKLKSGNEIKEALKRNVLDLLTSKGSKTELQLGFRKPAVIMIVGVNGGGKTTSLGKLAYRLKNEGAKILMAAGDTFRAAASDQLEIWAERTGCEIVVAESEKAKASSVLSQAVKKGKELGFDIVLCDTSGRLHTNYSLMEELISCKRSVAKVVAGAPNEILLVLDGTTGLNMLPQAREFNDVVGVTGLILTKLDGSARGGCVVSVVDELGIPVKFVGVGEGVEDLQPFDADAFVNAIFM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0729 373 PANTHER BNAA04G26420D PROTEIN 8 372 - -
Aed2g0729 373 Gene3D - 163 373 IPR027417 -
Aed2g0729 373 Pfam SRP54-type protein, GTPase domain 171 372 IPR000897 GO:0005525|GO:0006614
Aed2g0729 373 TIGRFAM ftsY: signal recognition particle-docking protein FtsY 100 372 IPR004390 GO:0006614
Aed2g0729 373 SMART SRP54_3 171 373 IPR000897 GO:0005525|GO:0006614
Aed2g0729 373 CDD FtsY 172 371 - -
Aed2g0729 373 SUPERFAMILY Domain of the SRP/SRP receptor G-proteins 71 148 IPR036225 -
Aed2g0729 373 PANTHER SIGNAL RECOGNITION PARTICLE RECEPTOR SUBUNIT ALPHA 8 372 - -
Aed2g0729 373 SMART SRP54_N_2 74 155 IPR013822 GO:0005525|GO:0006614
Aed2g0729 373 ProSitePatterns SRP54-type proteins GTP-binding domain signature. 346 359 IPR000897 GO:0005525|GO:0006614
Aed2g0729 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 168 371 IPR027417 -
Aed2g0729 373 Gene3D - 61 162 IPR042101 -
Aed2g0729 373 SMART AAA_5 170 343 IPR003593 -
Aed2g0729 373 Pfam SRP54-type protein, helical bundle domain 99 149 IPR013822 GO:0005525|GO:0006614
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0729 Aed-Chr2 5267386 5271732 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0729 K03110 - gmx:100791073 683.715