Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0721 ATGGGAGAAGCTACACAAAGGTATGCAGTTGTGACAGGTGCAAACAAAGGAATTGGATTAGAGATAGTTAGACAGTTAGCTTCAGCAGGAATCAAGGTGGTGCTGACAGCAAGAAATGAAGAGAAGGGTCTCAAAGCATTGGAAACATTCAGAGATTCAGGTCTTTCTCACCTTGTACTGTTTCATCGGGTGGACGTGGCTGATGCAACAAGTGTAGCTTCTCTGGCAGATTTTGTCAAATCTAAATTTGGAAAACTTGATATTCTGATTAACAATGCAGGGATTATTGGAGCTTCAATTGATGACACTGATTTAATCACTACAGTCATCATAAATCGTGGGGCTATACCAGAAGATGATGGGACAAAGGAAGTAATTCAGACATATGAGTTAGCAGAAGAATGCTTGCAAATAAATTATTATGGAGCCAAAATAACTATAGAATCCCTTATGCCCCTCCTCCAATTATCTGACTCACCAAGAATTGTGAATGTATCATCCACTCTGGGGCAGTTAGAGAGTTTTCCAAAAGGATCATGGGCCAGAGGAGTCTTCAATGATGTTGATAACCTAACTGAAGAGATAGTGGATGAAGTATTGAACAAGTTTCTCAGAGATTTCAAAGAAGGTTCATTAGAAAGTAAAGGCTGGACTAAGTATCTGAGTGCCTACATTGTCTCCAAAGCTGCTATGAATGCCTATACTAGAATCCTTGCTAAGAAGCACCCTTCATTCTGCATCAATAGTGTTTGCCCTGGCTATGTCAAGACAGATATAACTGCTAACACCGGCTTATTAACCGTTGAAGAAGGTGCTGCTAGTCCTGTGAGGCTAGCACTTCTTCCCAACAATGATAGTCCTTCTGGCCTCCACTATTACAGGAGTGATGTGGCTTCCTTTTGA 903 0.4097 MGEATQRYAVVTGANKGIGLEIVRQLASAGIKVVLTARNEEKGLKALETFRDSGLSHLVLFHRVDVADATSVASLADFVKSKFGKLDILINNAGIIGASIDDTDLITTVIINRGAIPEDDGTKEVIQTYELAEECLQINYYGAKITIESLMPLLQLSDSPRIVNVSSTLGQLESFPKGSWARGVFNDVDNLTEEIVDEVLNKFLRDFKEGSLESKGWTKYLSAYIVSKAAMNAYTRILAKKHPSFCINSVCPGYVKTDITANTGLLTVEEGAASPVRLALLPNNDSPSGLHYYRSDVASF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0721 300 CDD carb_red_PTCR-like_SDR_c 7 297 IPR045313 GO:0016616
Aed2g0721 300 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 300 - -
Aed2g0721 300 Pfam short chain dehydrogenase 8 173 IPR002347 -
Aed2g0721 300 PRINTS Glucose/ribitol dehydrogenase family signature 224 243 IPR002347 -
Aed2g0721 300 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Aed2g0721 300 PRINTS Glucose/ribitol dehydrogenase family signature 243 260 IPR002347 -
Aed2g0721 300 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Aed2g0721 300 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 283 IPR036291 -
Aed2g0721 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 224 243 IPR002347 -
Aed2g0721 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 168 IPR002347 -
Aed2g0721 300 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Aed2g0721 300 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 300 - -
Aed2g0721 300 Gene3D - 3 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0721 Aed-Chr2 5203813 5207559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0721 2 264 Acyl Lipid Metabolism Gene Families AT1G24360 21.612 2.39e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0721 K15095 - gmx:100801677 514.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0721 2 5203813 5207559 Aed2g0721 2 5203813 5207559 ECH