Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0720 ATGCCTGATCAGGAATTGTCATTGTTAGCCTTTGTCCTATTTATATGTACTTTGAAAACTATGACTTTGACAACCACAGGTTTTGCAATAGCTGGCTTGAAAGGTGAAACTGAACATGGGAGAAGCTACAGAAAGGTGTTCTTGGCATCCTTACTTTTTGTTTACAACTTCCAATTTCCAATTCTGTTGTTGAACTCAAATCTTACATTTTTTGAATCCCTTTTAACCTTTGTGGGGTGTGGGGTTGAGTTTGTCAGATATGCAGTTGTGACAGGTGCAAACAAAGGAATTGGGTTAGAGATAGTTAAGCAGTTAGCTTCATCTGGAATCAAGGTGGTGCTCACAGCAAGAAATGAAGAGAGGGGTCTCAAAGCATTGGAAACATTCAGAGACTCAGGTCTTTCTCACCTTGTACTGTTTCATCAGTTGGATGTGGCTGATGCAACAAGTGTAGCTTCTCTGGCAGATTTTATCAAATCTAAATTTGGGAAACTTGATATTCTGATTAACAATGCAGGGATTGGTGGAGCTGTAATTAAAGACACTGATTCATTCCCTTCGCTCCTCATGAAGCGTGGGGCAGCATCAGAAGAAGATGGGACAAAGGCAATCTCTCAGTCATATGAGTTAGTTGAAGAATGCTTGCAAATAAATTACTATGGTGCTAAAACAATTGTAGAATCCCTTTTGCCCCTCCTCCAGTTATCTGATTCACCAAGAATTGTTAATGTATCATCAAAGATGGGGCAGTTAGAGAGTTTTCCAAAAGGATCATGGGCAAGAGGAATCTTCAGTGACGCTGATAACCTCACTGAAGAGAAAGTGGATGAAATATTGAATAAGTTTCTTGGAGATTTCCAAGAAAGTTCATTTGAAAGCGAAGGATGGCCTAGGTTTTTGGGTGCCTACATTGTCTCTAAAGCTGCTATAAATGCCTATACTAGAATACTTGCTAAGAAATACCCTTCATTCTGCATCAATAGTGTTTGCCCCGGCTATGTCAAGACAGATATAACTGCTAACACCGGCCTCTTAACGGTTGAAGAAGGTGCTGCGAGTCCTGTGAGGCTAGCACTTCTTCCCAATGGTAGTCCATCAGGCTTCTTCTATGACAGGAATCAGGTGGCTTCCATTTGA 1137 0.4081 MPDQELSLLAFVLFICTLKTMTLTTTGFAIAGLKGETEHGRSYRKVFLASLLFVYNFQFPILLLNSNLTFFESLLTFVGCGVEFVRYAVVTGANKGIGLEIVKQLASSGIKVVLTARNEERGLKALETFRDSGLSHLVLFHQLDVADATSVASLADFIKSKFGKLDILINNAGIGGAVIKDTDSFPSLLMKRGAASEEDGTKAISQSYELVEECLQINYYGAKTIVESLLPLLQLSDSPRIVNVSSKMGQLESFPKGSWARGIFSDADNLTEEKVDEILNKFLGDFQESSFESEGWPRFLGAYIVSKAAINAYTRILAKKYPSFCINSVCPGYVKTDITANTGLLTVEEGAASPVRLALLPNGSPSGFFYDRNQVASI 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0720 378 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 303 322 IPR002347 -
Aed2g0720 378 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 163 174 IPR002347 -
Aed2g0720 378 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 239 247 IPR002347 -
Aed2g0720 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 86 364 IPR036291 -
Aed2g0720 378 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 86 377 - -
Aed2g0720 378 Pfam short chain dehydrogenase 87 252 IPR002347 -
Aed2g0720 378 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 86 377 - -
Aed2g0720 378 PRINTS Glucose/ribitol dehydrogenase family signature 87 104 IPR002347 -
Aed2g0720 378 PRINTS Glucose/ribitol dehydrogenase family signature 303 322 IPR002347 -
Aed2g0720 378 PRINTS Glucose/ribitol dehydrogenase family signature 163 174 IPR002347 -
Aed2g0720 378 PRINTS Glucose/ribitol dehydrogenase family signature 322 339 IPR002347 -
Aed2g0720 378 Gene3D - 85 378 - -
Aed2g0720 378 CDD carb_red_PTCR-like_SDR_c 86 375 IPR045313 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0720 Aed-Chr2 5199412 5202147 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0720 89 343 Acyl Lipid Metabolism Gene Families AT1G24360 22.222 2.10e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0720 K15095 - gmx:102663482 498.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0720 2 5199412 5202147 Aed2g0720 2 5199412 5202147 ECH