Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0719 ATGGGGGTTGAGTTTGTCAGATATGCAGTTGTGACAGGTGCAAACAAAGGAATTGGATTAGAAATAGTTAAACAGTTAGCTTCAGTTGGAATCAAGGTGGTGCTCACAGCAAGAAATGAAGAGAGGGGTCTCAAAGCATTGGAAACATTCAAAGACTCAGGTCTTTCTCACCTTGTACTGTTTCATCAGATGGATGTGACTGATGCTACAAGTGTAGCTTCTCTGGCAGATTTTGTCAAATCTAAATTTGGAAAACTTGATATTCTGATTAACAATGCAGGCGTTTCTGGAATTGTATTTGAAGACCTTGATATAATGGCTACAGTCATCAAGAATCGTGGGTTATCTGATTCTCCAAGAATTGTGAATGTATCAGCCACTCTGGGGCAGTTAGAGAGTTTCCCAAAAGAATCATGGGCCAGAGAAGTCCTCAGTGATGCAGACAACCTTACAGAAGAGAAAGTGGATGAAATATTGAACAAGTTTCTCAAAGATTTCCAAGAAGGCTCATTAGAAAGTAATGGTTGGCCAAGGTGTTTTAGTGCCTATGTTGTCTCCAAAGCTGCTATGAATGCCTATACCAGAATCTTATCTAGAAAATACCCTTCATTCTGCGTCAATAGTGTTTGCCCTGGCTATGTCAAGACAGATATAAATTCCAACACTGGCTACTTAACAGTTGAAGAAGGTGCTGCTAGTCCTGTTAGGCTAGCACTTCTTCCCAATGGCAGTCCTTCTGGCCTCTACTATTACAGGAATGATGTGGCTTCATTTTGA 777 0.4067 MGVEFVRYAVVTGANKGIGLEIVKQLASVGIKVVLTARNEERGLKALETFKDSGLSHLVLFHQMDVTDATSVASLADFVKSKFGKLDILINNAGVSGIVFEDLDIMATVIKNRGLSDSPRIVNVSATLGQLESFPKESWAREVLSDADNLTEEKVDEILNKFLKDFQEGSLESNGWPRCFSAYVVSKAAMNAYTRILSRKYPSFCVNSVCPGYVKTDINSNTGYLTVEEGAASPVRLALLPNGSPSGLYYYRNDVASF 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0719 258 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 170 198 IPR020904 GO:0016491
Aed2g0719 258 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 244 IPR036291 -
Aed2g0719 258 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Aed2g0719 258 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 183 202 IPR002347 -
Aed2g0719 258 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 7 114 - -
Aed2g0719 258 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 115 258 - -
Aed2g0719 258 Pfam short chain dehydrogenase 8 100 IPR002347 -
Aed2g0719 258 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 115 258 - -
Aed2g0719 258 PRINTS Glucose/ribitol dehydrogenase family signature 202 219 IPR002347 -
Aed2g0719 258 PRINTS Glucose/ribitol dehydrogenase family signature 183 202 IPR002347 -
Aed2g0719 258 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Aed2g0719 258 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Aed2g0719 258 Gene3D - 6 258 - -
Aed2g0719 258 PANTHER SHORT-CHAIN DEHYDROGENASE/REDUCTASE 7 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0719 Aed-Chr2 5192606 5196923 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0719 7 105 Acyl Lipid Metabolism Gene Families AT3G55290 37.500 1.07e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0719 K15095 - gmx:100801677 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0719 2 5192606 5196923 Aed2g0719 2 5192606 5196923 ECH