Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0716 ATGGGAGAAGAAGCAAAAAGGTATGCAGTAGTGACAGGAGCTAACAAAGGAATTGGTTATGGGATATGCAAGAAATTGGCTTTGAATGGAGTAGTGGTGGTGCTAACTGCTAGAAATGAGAAAAGGGGTTTGGATGCTGTGGAAAGGTTGAAAGAGTTTGGCCTCTCAGACCTTCTAGTTTTTCATCAACTTGATGTCACTGACCCTCCTAGTGTTGCTGCTTTGGCACAATTCATCAAAACCCGATTTGGAAGACTTGACATCTTGGTGAACAATGCAGGTGTTCCCGGAGGAATAGTAAATGGAGAGAATGTTCTTAGAAGGAAAAGGGGTGAAATATCAGATTGGAATATAATAGTACGCCAAAATTATGAGTTGGCCGAAGAATGCGTTGAAATAAACTTCTTTGGTGCAGAAAGAGTAACTGAAGCTCTTCTTCCCCTGCTCCAATTATCCACTTCACCCAGGATTGTCAATGTATCCTCTAGAATAGGAGTATTGAAGAATATACCAAATGAGTGGGCAAGAGGAGTGTTTGGTGACATTGAAAACCTTACAAACAAAAAGCTTGATGTGGTGCTTAGGGAGTTTCTGAAAGATTACAAAGAAGGATCATTGGAATCCAAGAACTGGCCACATGTTCTTTCAGGCTACACCATGTCAAAAACAGCCTTAAATTCCTACACAAGGATGCTGGCTAAGAAGTTCCCTCGTTTTCGCATAAATTGCTTGTGCCCTGACTTTGTCAAAACTGACATAAACCATAATGTTGGCTTCTTAACCATTGATGAAGGTGCTGAGTGTCCTGCCAGGCTTGCATTGTTGCCAGATAATGGTCCTTCTGGTCTCTTTTTCTTAAGGGAGGAATCCACTCATATTTTCAGGCATTTCCCTCTTTCAAGAGTAATGGCAGAAGCAACTAAAGGGTATGCGGTTGTAACAGGTGCAAATAAGGGAATCGGATTTGCAGTATGCAGGCAATTGGCTTCTAATGGGATCACTGTGGTACTCACAGCAAGAGATGAGAAGAGGGGTCTCCAAGCTGTTGAGAAACTCAAAGAGCTTGGTCTTCCTGGCCATGTGGTTTTCCATCAACTTGATGTTACAGACCCTGCAGGTATAAGATCAATTGCAGATTTCATCAGGAACCATAGCCCTTCTAAATGTCAAGAAATATTTGAAACTTGGAAAATTGTGAAGGTAAACAATGCTGGAATTCCTGGAGCACATGTGGACGGTGAGGCCATGGCTGCTGCTGGTATTATGGAAAATGCTGGTCGTGTTGATTGGAGTAAAATAGTAACTGAAACCTATGAATTAACTGAAGCAGGCCTCAAAACAAACTACTATGGAGCCAAGGAATTGACCAAAGCACTTATTCCCCTTCTCCAGTTTTCAGACTCCCCAAAAATTGTCAATGTTTCCTCATCCATGGGAAGGCTAGAGCATATACCAAATGGATGGCCTAAAGAAGTACTGAGTGATGTTGAAAACCTTACAGAAGAAAAAGTTGATGAGATTTTGAATGAATTTCTAAAGGATTTTAAAGAGGGTTCACTAGAAACTAAAGGCTGGCCTCTTGCTATGTCTGCATATAGTGTCTCAAAAGCAGCTGTTAATGCCTACACAAGGATTCTGGCCAAGAAGTACCCCTCATTCTGCATCAATGCACTTTGTCCTGGCTATGTTAAAACTGATATGAACAAAAGTACTGGTTTTCTTACACCTGATGAAGTACGGTACAGTATACCTGTGTTCTGCTTCACTCCATCTCTTGCACTTGGACTTCGACGACAAAGTGCCGCCGTGATTGGTTTGGGTGCCTGGCAACAACAGCTCCGCCTCCGCTGGTGCGTGCGGGTGATAATGAGAGTAGTCGTTGTTGGCGCCATTAATGTTGTGCTGTTGTTGTTGCGGTGGCAATTGATCTTGAAAGTGATTGAGGACGACATCCTCTGCCGGCGGAGACAGCATCATTGCAGGAACGTGAGTAGCGGTGGCGGCGGTGTTGGATGA 2016 0.4315 MGEEAKRYAVVTGANKGIGYGICKKLALNGVVVVLTARNEKRGLDAVERLKEFGLSDLLVFHQLDVTDPPSVAALAQFIKTRFGRLDILVNNAGVPGGIVNGENVLRRKRGEISDWNIIVRQNYELAEECVEINFFGAERVTEALLPLLQLSTSPRIVNVSSRIGVLKNIPNEWARGVFGDIENLTNKKLDVVLREFLKDYKEGSLESKNWPHVLSGYTMSKTALNSYTRMLAKKFPRFRINCLCPDFVKTDINHNVGFLTIDEGAECPARLALLPDNGPSGLFFLREESTHIFRHFPLSRVMAEATKGYAVVTGANKGIGFAVCRQLASNGITVVLTARDEKRGLQAVEKLKELGLPGHVVFHQLDVTDPAGIRSIADFIRNHSPSKCQEIFETWKIVKVNNAGIPGAHVDGEAMAAAGIMENAGRVDWSKIVTETYELTEAGLKTNYYGAKELTKALIPLLQFSDSPKIVNVSSSMGRLEHIPNGWPKEVLSDVENLTEEKVDEILNEFLKDFKEGSLETKGWPLAMSAYSVSKAAVNAYTRILAKKYPSFCINALCPGYVKTDMNKSTGFLTPDEVRYSIPVFCFTPSLALGLRRQSAAVIGLGAWQQQLRLRWCVRVIMRVVVVGAINVVLLLLRWQLILKVIEDDILCRRRQHHCRNVSSGGGGVG 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0716 671 Pfam short chain dehydrogenase 528 570 IPR002347 -
Aed2g0716 671 Pfam short chain dehydrogenase 8 167 IPR002347 -
Aed2g0716 671 Pfam short chain dehydrogenase 311 481 IPR002347 -
Aed2g0716 671 CDD carb_red_PTCR-like_SDR_c 7 285 IPR045313 GO:0016616
Aed2g0716 671 PANTHER OXIDOREDUCTASE-RELATED 1 290 - -
Aed2g0716 671 PANTHER OXIDOREDUCTASE-RELATED 303 578 - -
Aed2g0716 671 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 205 233 IPR020904 GO:0016491
Aed2g0716 671 Gene3D - 3 293 - -
Aed2g0716 671 Gene3D - 303 592 - -
Aed2g0716 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 310 589 IPR036291 -
Aed2g0716 671 ProSitePatterns Short-chain dehydrogenases/reductases family signature. 519 547 IPR020904 GO:0016491
Aed2g0716 671 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 1 290 - -
Aed2g0716 671 PANTHER (+)-NEOMENTHOL DEHYDROGENASE 303 578 - -
Aed2g0716 671 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 IPR002347 -
Aed2g0716 671 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 163 IPR002347 -
Aed2g0716 671 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 218 237 IPR002347 -
Aed2g0716 671 PRINTS Glucose/ribitol dehydrogenase family signature 8 25 IPR002347 -
Aed2g0716 671 PRINTS Glucose/ribitol dehydrogenase family signature 84 95 IPR002347 -
Aed2g0716 671 PRINTS Glucose/ribitol dehydrogenase family signature 218 237 IPR002347 -
Aed2g0716 671 PRINTS Glucose/ribitol dehydrogenase family signature 149 165 IPR002347 -
Aed2g0716 671 PRINTS Glucose/ribitol dehydrogenase family signature 237 254 IPR002347 -
Aed2g0716 671 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 276 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0716 Aed-Chr2 5156383 5173781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0716 10 258 Acyl Lipid Metabolism Gene Families AT1G24360 22.619 2.32e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0716 K15095 - qsu:111996010 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0716 2 5156383 5173781 Aed2g0716 2 5156383 5173781 ECH