Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0601 ATGGCGGGAAACACATCATGGATCAGCCACTACGATGATGGTGCTCGAAGGGAGACTAGGGAGGTTGATTCATTTTTGGAATTTGCCGAGGAAGTTGATAAAGAAGGAAGTGTTGCTTCTGTGGATGCTCTTTTGCCTGATGAATTGGTGGAGCGTATCTTGGCCTATCTCCCCATTGCAAGCATTTTCAGAGCAAGTTGTGTGTGTAAAAGGTGGTATGAGATTGTTACTTCTAAAAGGTTTCTATGGAACCCTTCCAATTTGCCGCCACAGAAACCTTGGTACTTTATGTTTACCCACTCAGATGAACCAACTGGTTATGCCTATGATCCCACCCTTCGGAAATGGTCTGGCATTAAGCTTCCCTTCATTGAAACTTCTACTTGGTTCATTGCTTCGTCATACGGTTTAGTTTGCTTCATGGACAATGACAGCAGAAGCAAATTATGCATCTGCAACCCGATTACAAAAAGCTACAGGAAGCTCGAGGAGCCTCCAGGTTTGAAATGTTCTGATTACGGTGCATTGGCAATGTCAGTGAACAGGAAATCCCATAGTTACACTGTGGCAGTCGTGAAATCAAAGCAAATCCCAGAGGATTTTGTGCACTGGGATGTCTCAATTCATATATACAATTCAAAGAATGAGACCTGGAAGACAACTTCAACAGAGGTTTTGATGGGGTGGAGAGGTGGTAATGAGAGTGTGATCTGCAATGGTGTGCTATACTTTCTAGTTTACTCGGCTGGGTGTGTTCCATCAGAAAATCGTCATGCGCTGATTGCATACAATATCTCCGATTGTGCGTCTCAAACTACCTTGAGAAGGAGCTTTATTGCTGTACCTTGTTCACTAACTTGTGGTCGTCTGATGAATATGAAGGAGAAGCTTGTGATGGTGGGAGGAATTGGTAAGCATGAGCGACCTGACATAATCAAAGGAATTGGCATATGGATTCTTAATGATAGGAAGTGGGAAGAGATTGCTCGAATGCCACACAAATACTTCCAAGGCTTTGGGGAGTTTGATGATGTTTTTGCTAGCTGTGGTACAGATGATCTGATTTACATTCAAAGTTATGGATCTCCAGCACTTCTCACATTTGACATCAACCTTAAGCAATGGAAATGGTCACAGAAATGCCCAGTATCAAAGAGGTTCCCTCTACAGCTTTTCACTGGTTTTTGCTTTGAGCCAAGGCTTGAAATTGTTCCATAG 1218 0.4302 MAGNTSWISHYDDGARRETREVDSFLEFAEEVDKEGSVASVDALLPDELVERILAYLPIASIFRASCVCKRWYEIVTSKRFLWNPSNLPPQKPWYFMFTHSDEPTGYAYDPTLRKWSGIKLPFIETSTWFIASSYGLVCFMDNDSRSKLCICNPITKSYRKLEEPPGLKCSDYGALAMSVNRKSHSYTVAVVKSKQIPEDFVHWDVSIHIYNSKNETWKTTSTEVLMGWRGGNESVICNGVLYFLVYSAGCVPSENRHALIAYNISDCASQTTLRRSFIAVPCSLTCGRLMNMKEKLVMVGGIGKHERPDIIKGIGIWILNDRKWEEIARMPHKYFQGFGEFDDVFASCGTDDLIYIQSYGSPALLTFDINLKQWKWSQKCPVSKRFPLQLFTGFCFEPRLEIVP 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0601 405 PANTHER OS02G0260200 PROTEIN 2 404 - -
Aed2g0601 405 SUPERFAMILY Galactose oxidase, central domain 106 384 IPR011043 -
Aed2g0601 405 SMART fbox_2 45 85 IPR001810 GO:0005515
Aed2g0601 405 Pfam F-box-like 45 84 IPR001810 GO:0005515
Aed2g0601 405 TIGRFAM F_box_assoc_1: F-box protein interaction domain 136 337 IPR017451 -
Aed2g0601 405 PANTHER F-BOX FAMILY PROTEIN 2 404 IPR045048 -
Aed2g0601 405 Gene3D - 90 393 IPR015915 GO:0005515
Aed2g0601 405 ProSiteProfiles F-box domain profile. 39 86 IPR001810 GO:0005515
Aed2g0601 405 Gene3D - 40 85 - -
Aed2g0601 405 SUPERFAMILY F-box domain 44 143 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0601 Aed-Chr2 4353719 4354936 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0601 - - gmx:100817678 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g2631 2 28580172 28583257 Aed2g0601 2 4353719 4354936 PCT