Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0574 ATGTGCAGATTCAGCCCCTCCATTCTCATTGCACTACTCTTCCATCCAACCACTTCCACCAATAGAAGGATCCTCCGCCAACTCACCACTGATGACTCCACACACTCATCAACCTCCGCCAACCTCCTCGCCGCTGCTGTCGCCGCCGTAGCCTGCGCTCTCCTCGTCGTCGCCGTCTCCGCCTTCGTCTACTGCCTCCGCAGACGCAAGAGCTACTCCGACCACGCCACCACCACCAACTTCTTTCCCTGCGAAGCCGCCGCCGCCGAGAAAGAAAGAAACAACTCCGAGGAATCAAATTCTGAAGTTGATGAGTTTGGAGTATCCCATAACGAGGCTGAAACAGAGATTTTACCACGTTTTCTAAGTTTACTACATTTTCTAATTTTACTCAGAGAAGAAAAGAAGAAACAGGCAGCCAAGTTGGAAGAAGTGCAAAGTTTCTTGAATGAAGATATTAAGGAGGTAGAAAGAAGTTATTCATCAGTGTTTCCTTCTTTGGCACAAATGAACAATCTTGAAGGGATAATAATAGGAAATAGTTCACAATCTCAAGACTCTTCAAGTTCAGACATGAGTAGATGGATTCGAAGGTCACTTGTTGATGAAGAAAGACTTGTGAGTAACACTTACTTTTCCGCGAGATCGCAACTCCTCTTGCCTAAAGATGCTTCATCTGTTTCAAGCAATGATAAAAATGTGATGGAGAATGCTAATAATATGGAGCCTAGAAGAATTCAGAATTCTGTTGGTTGTTGTCTAGCATCCTTCTGTGAAGGTTTATGCAAGTTTGCTCGTTACAGCAAGTTTGAAGAGCGTGGCAGATTAAGAAACAGTGATCCGTTTAGTTCTGCCAATATAGTAAGTTCTTTAAGTTTTGATCGTGATGAGGATTACATTGCAGCAGCAGGAGTTTCAAAGAAAATCAAGATTTTCGACCTCAATGCTATTTCAAGCGATTCTGCTGACATGCAGTACCCACCATTAGTTGAGATGACAAACGAATCAAAGCTTAGTAGTGTGTGCTGGAACACTTACATAAAAAATCATCTGGCATCTGCTGACTATGAGGGTGCAGTTCAGATGTGGGATGCAGACACTGGTCAGCCATTGTCTCTATACATGGAGCACCAAAAGAGAGCTTGGTCTGTTCACTTTTCTCTGTCAGACCCCAAAATGTTTGCTAGTGGAAGTGATGACTGCTCTAGAAAATCTATAAGAACAATATGGAGCCCTGCCAATATATGCTCTGTTCAGTTCTCAGCTTACTCAACAAATCTTCTATTTTTTGGATCAGCTGATCACATGGTTTATGGTTATGATCTTCGTCACACTCGAATTCCTTGGTGCACATTAGCCGGTCACGCGAAAGCTGTTAGCTATGTGGAATTTATAGATGCTGAAGCAGTTGTGTCTGCTTCCACTGACAACACTTTGAAGCTTTGGGACCTCAAGAAAACCACCTCTTCTGCTTTGTCATCTGATGCTTGTGCTGTTACCTTTAAAGCTCATGATCCTCATCCTCATCCTCATCATCTTCTTTTTCTTCTTCTCCAGAATTTCGTGGGGTTATCTGTTTTGGATGGATACATTGCATGTGGTTCAGAATCTAATGAGGTGTACTGTTATCACAAATCACTGCCATTGCCAATTGCTACTCATAAATTTGAGTCAACTGATCCAATTTCTGGTCATCTAAATAGTGGTGGCAATAGTGGACATTTTGTTTCTAGTGTTTGCTGGAGAAAGAAATCTAACATGCTTGTTGCTGCCAACTCAGTTGGAATTGTGAAACTATTGCAAATGGTCTGA 1812 0.4255 MCRFSPSILIALLFHPTTSTNRRILRQLTTDDSTHSSTSANLLAAAVAAVACALLVVAVSAFVYCLRRRKSYSDHATTTNFFPCEAAAAEKERNNSEESNSEVDEFGVSHNEAETEILPRFLSLLHFLILLREEKKKQAAKLEEVQSFLNEDIKEVERSYSSVFPSLAQMNNLEGIIIGNSSQSQDSSSSDMSRWIRRSLVDEERLVSNTYFSARSQLLLPKDASSVSSNDKNVMENANNMEPRRIQNSVGCCLASFCEGLCKFARYSKFEERGRLRNSDPFSSANIVSSLSFDRDEDYIAAAGVSKKIKIFDLNAISSDSADMQYPPLVEMTNESKLSSVCWNTYIKNHLASADYEGAVQMWDADTGQPLSLYMEHQKRAWSVHFSLSDPKMFASGSDDCSRKSIRTIWSPANICSVQFSAYSTNLLFFGSADHMVYGYDLRHTRIPWCTLAGHAKAVSYVEFIDAEAVVSASTDNTLKLWDLKKTTSSALSSDACAVTFKAHDPHPHPHHLLFLLLQNFVGLSVLDGYIACGSESNEVYCYHKSLPLPIATHKFESTDPISGHLNSGGNSGHFVSSVCWRKKSNMLVAANSVGIVKLLQMV 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0574 603 ProSiteProfiles Trp-Asp (WD) repeats profile. 452 492 IPR001680 GO:0005515
Aed2g0574 603 PANTHER PROTEIN SPA1-RELATED 2 95 603 IPR044630 GO:0009640
Aed2g0574 603 ProSitePatterns Trp-Asp (WD) repeats signature. 470 484 IPR019775 -
Aed2g0574 603 SUPERFAMILY WD40 repeat-like 286 599 IPR036322 GO:0005515
Aed2g0574 603 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 452 485 - -
Aed2g0574 603 Gene3D - 257 603 IPR015943 GO:0005515
Aed2g0574 603 Pfam WD domain, G-beta repeat 286 313 IPR001680 GO:0005515
Aed2g0574 603 Pfam WD domain, G-beta repeat 451 483 IPR001680 GO:0005515
Aed2g0574 603 PANTHER LIGASE COP1, PUTATIVE-RELATED 95 603 - -
Aed2g0574 603 Coils Coil 132 159 - -
Aed2g0574 603 SMART WD40_4 555 601 IPR001680 GO:0005515
Aed2g0574 603 SMART WD40_4 402 441 IPR001680 GO:0005515
Aed2g0574 603 SMART WD40_4 278 313 IPR001680 GO:0005515
Aed2g0574 603 SMART WD40_4 445 483 IPR001680 GO:0005515
Aed2g0574 603 SMART WD40_4 325 364 IPR001680 GO:0005515
Aed2g0574 603 SMART WD40_4 367 401 IPR001680 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0574 Aed-Chr2 4174772 4179369 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0574 K16240 - gmx:100802144 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0574 2 4174772 4179369 Aed2g0574 2 4174772 4179369 ECH