Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0565 ATGACGAGAGTGAAGCACACACCAGCTTCTCGCAAATCCAGTAAAAAGAAAGCACCACACGCATCTACATCAACGCAGCCACAACCGCCTGCAACTAGAGAGACAAGGAGAGCTCAGCAAGAGGAGCTGCAGGCGCCGGGGACTGAGGGAAGGAAGAAAAGGCGTAATAAGCCAGGTGCTGTGGCGCTTCGTGAGATTCGGCATTTTCAGAAGACGTGCAACCTTCTTATCCCAGCTGCCCCCTTTATCAGATGTGTGAGTTTTTCTGCAGCCATCAACATTTTGCTCTCAAGTGAAAAATTACCCGATTTTGTGTGTTTGCTTAGGAATATTTTTCTTACTTTTACCACTTATTCACTGATGAATGTGCTTGAAGAACATGCTCTGTATGGAATTAAATCTTGTGAGAAGTTTGTTCTTGCTGTTTTGGTCAAACAGATTACAAACCAATTCTCTACGGAGGTGTCTCGCTGGACACCTGAAGCTGTGGTAGCACTTCAGGAGGCAGCTGAGGAATATCTGGTTCACTTGTTTGAAGATGGAATGCTCTGTGCAATTCATGCAAGACGTATTACTCTTAGTAATGAAAAAGGATATAGAGTTGGCCCGGAGGCTTGGAAGAATAGGAAGGCCTTGGGACTCGAGAGTACAGGGGATTTCAATGAAGACATTGTTGCTTGTATACCCAACACTCAAATTGCAACTCGTGGAAATGCTTAA 720 0.4486 MTRVKHTPASRKSSKKKAPHASTSTQPQPPATRETRRAQQEELQAPGTEGRKKRRNKPGAVALREIRHFQKTCNLLIPAAPFIRCVSFSAAINILLSSEKLPDFVCLLRNIFLTFTTYSLMNVLEEHALYGIKSCEKFVLAVLVKQITNQFSTEVSRWTPEAVVALQEAAEEYLVHLFEDGMLCAIHARRITLSNEKGYRVGPEAWKNRKALGLESTGDFNEDIVACIPNTQIATRGNA 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0565 239 Gene3D Histone, subunit A 136 197 IPR009072 GO:0046982
Aed2g0565 239 MobiDBLite consensus disorder prediction 35 58 - -
Aed2g0565 239 SUPERFAMILY Histone-fold 137 194 IPR009072 GO:0046982
Aed2g0565 239 MobiDBLite consensus disorder prediction 1 58 - -
Aed2g0565 239 Pfam Core histone H2A/H2B/H3/H4 139 194 IPR007125 GO:0003677
Aed2g0565 239 Pfam Core histone H2A/H2B/H3/H4 21 85 IPR007125 GO:0003677
Aed2g0565 239 MobiDBLite consensus disorder prediction 19 34 - -
Aed2g0565 239 SUPERFAMILY Histone-fold 27 86 IPR009072 GO:0046982
Aed2g0565 239 SMART h35 48 201 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aed2g0565 239 PANTHER HISTONE H3 9 195 IPR000164 GO:0000786|GO:0003677|GO:0030527
Aed2g0565 239 PANTHER HISTONE H3-LIKE CENTROMERIC PROTEIN HTR12 9 195 - -
Aed2g0565 239 Gene3D Histone, subunit A 3 94 IPR009072 GO:0046982
Aed2g0565 239 MobiDBLite consensus disorder prediction 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0565 Aed-Chr2 4093827 4097671 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0565 K11253 - gmx:100811872 122.479
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0565 2 4093827 4097671 Aed2g0565 2 4093827 4097671 ECH