Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0546 ATGTCCCTCATCACTCGCTTTACCCGCCAAAATTCCTCAAGCGCCTCGCTCCTCACGCGCCACCTCTGCTCCGCCGCATCCAAACTCCACGCCAGTTACACTTTCAAACCACCGTCTTCTCTCACTCCTGAATCCCAATGCCCCAACTCCCCTCCCACCAGGCCCAACCAGAAAAAGCCCAAGCCCAGGTACCGGCCCCCCTCCTCCCTCGACCGGACAGGCCGGAAGCCAGTCCGGTCCAACGACCTGCCATTCGATTTCCGGTTCAGCTACACGGAGAGCAGCGCCAAGGTGCGGCCAATCGGGCTCAGGGAGCCCAAGTACTCGCCTTTTGGGCCGGGGCGGGTTGATAGAAAGTGGACCGGAGTGTGCGCACCGGCGGTGGACCCCACAGTGGAGAGCTTGGAGGGGTCGGAGGACCCTAAGTTGGAGGAGGAGAGAAAGAAGAAGAGAGAGATGATTCAAGGAAAACCACTTACGAATGAAGAGAGAAAGGCACTGGTTTCGCAATTTGAGAGAAGCAAAACTAATAGGCATGTCAATCTCGGGAGGGATGGTTTAACTCACAACATGCTGAATGTTATTCATAACCATTGGAAATTTTCTGAAGCAGTTAGAATCAAATGCATGGGTGTTCCAACTATGGACATGAAAAATATTTGTACCCAGCTTGAGGACAAATTATTTGGGAAGGTCATTTTCAGACATGGGGGTACACTTATATTATACAGAGGCAGGAATTATATTCCGAAAAAGAGGCCTGTAGTTCCTGTCATGTTATGGAAGCCCCATGAACCTGTATATCCCAGACTGATTAAGACAACAATTGATGGCTTAAGTATTAAGGAAACAAAAGAAATGCGGAAGAGGGGCCTAGCTGTACCTGCTTTAACAAAACTTGCCAAAAATGGTTATTATGCTTTTTTGGTACCCATGGTCAGAGATGCTTTCCTCTCCTGTGAATTGGTTCGGATAGACTGTGAAGGGCTTGAGCGGAAAGATTACAAGAAAATAGGCTGCAAACTCAGGGACATGGTCCCCTGTATTCTGGTGACTTTCGAGAATGAACAAATTGTGGTTTGGAGGGGGAACGATTACAAGCCCCCGAATGATGGATACTTTCTTAAAGATCGAGAATCGTTTGACGACAATGATGACTTGTGTGCAGGAAAAGAGCAACAGGCTATGTAA 1191 0.487 MSLITRFTRQNSSSASLLTRHLCSAASKLHASYTFKPPSSLTPESQCPNSPPTRPNQKKPKPRYRPPSSLDRTGRKPVRSNDLPFDFRFSYTESSAKVRPIGLREPKYSPFGPGRVDRKWTGVCAPAVDPTVESLEGSEDPKLEEERKKKREMIQGKPLTNEERKALVSQFERSKTNRHVNLGRDGLTHNMLNVIHNHWKFSEAVRIKCMGVPTMDMKNICTQLEDKLFGKVIFRHGGTLILYRGRNYIPKKRPVVPVMLWKPHEPVYPRLIKTTIDGLSIKETKEMRKRGLAVPALTKLAKNGYYAFLVPMVRDAFLSCELVRIDCEGLERKDYKKIGCKLRDMVPCILVTFENEQIVVWRGNDYKPPNDGYFLKDRESFDDNDDLCAGKEQQAM 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0546 396 SUPERFAMILY YhbY-like 158 253 IPR035920 -
Aed2g0546 396 Gene3D - 158 255 IPR035920 -
Aed2g0546 396 MobiDBLite consensus disorder prediction 34 83 - -
Aed2g0546 396 MobiDBLite consensus disorder prediction 132 151 - -
Aed2g0546 396 SUPERFAMILY YhbY-like 279 369 IPR035920 -
Aed2g0546 396 PANTHER CRS2-ASSOCIATED FACTOR 1, MITOCHONDRIAL 4 393 - -
Aed2g0546 396 MobiDBLite consensus disorder prediction 135 151 - -
Aed2g0546 396 Pfam CRS1 / YhbY (CRM) domain 159 244 IPR001890 GO:0003723
Aed2g0546 396 Pfam CRS1 / YhbY (CRM) domain 280 362 IPR001890 GO:0003723
Aed2g0546 396 ProSiteProfiles CRM domain profile. 157 255 IPR001890 GO:0003723
Aed2g0546 396 Gene3D - 279 372 IPR035920 -
Aed2g0546 396 SMART CRS1_YhbY_2 279 362 IPR001890 GO:0003723
Aed2g0546 396 SMART CRS1_YhbY_2 159 244 IPR001890 GO:0003723
Aed2g0546 396 ProSiteProfiles CRM domain profile. 277 373 IPR001890 GO:0003723
Aed2g0546 396 PANTHER CRS2-ASSOCIATED FACTOR 1, CHLOROPLASTIC 4 393 IPR044599 GO:0000373
Aed2g0546 396 MobiDBLite consensus disorder prediction 64 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0546 Aed-Chr2 3959682 3967592 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0546 - - gmx:100789954 738.028