Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0545 ATGGCACCAAGAAACAGTCGCGGAAAGCCCAAGGGAGAGAAGAAAAAGAAGGAAGAAAAGGTTCTTCCGGTTGTCATTGATATCACTGTGAAGCTTCTCGATGAAACTCATGTTCTCAAGGGAATATCAACGGACAGAATTATAGATGTTCGTCGGCTTTTATCAGTGAACACGGAGACGTGTTATGTCACCAATTTTTCCTTTGCGCATGAGGTAAGGGGACCACATCTGAAGGACACGGTGGACGTGTCCGCACTGAAACCCTGCGTCCTCAATTTAATTGAAGAGGATTACGATGAAGAACAAGCGGTGGCGCACGTGCGAAGACTCCTTGACATAGTCGCATGCACCACGAGCTTTGGTCCATCGTCTCCGGCACCACCGAAGAATGATTCCGTGTCCAAGTCTGGTAAGTCCGAAGTGCCGCTGGAGAAGCAATCTGCAAAAGATGAGGCAGCGATCGCGGCAGCTACAGCAGACATGGACGGCGAGATAAGTCACTCGTGCCCAAATCTAGAGAACTTCTACGAGTTTTTCTCTCTCTCACACCTCACTGCACCTATCCAATATGTGAAGAGAGGTTCGAGGCGGCGCGTGGAGGAAATATTGGAGGAGGATTATCTGTTCTCGCTGGACGTGAGCATTTTGTTTGAATTTTGTGGTGCAGCGCTTGGGAAAGGGAAATTGATGAGTGTGAAGGTGTGTAACGGTAAAGTAGTGCATGTTGAAGCATGCAGGAAGGGCTTTTATAGTGTTGGGAAGCAGCGGATATTGTGCCATAATCTGGTTGATTTGTTGAGACAGCTTAGCAGAGCTTTCGATAATGCTTTCGATGATCTCTTGAAGGCATTTTCAGAACGTAACAAGTTTGGGAATCTCCCATATGGCTTCAGAGCCAACACGTGGCTTGTTCCTCCTGTTGCAGCACAACCACCCTCATCTTTTCCTCCTCTTCCCGTGGAGGATGAAACATGGGGAGGGAATGGTGGTGTCAAACATGTTATGGAAGAGCCCAATTTTGGCTGCTCGGTTGTAGAAAATAATATTATTTACACTGAGAGAGTAGGTGACTTGAGTATCAACGTTTTGAAAGATGGTTCTGTCGCAAGCTGTAAGATTGATACTAAAATTGATGGAGTTGAAGCTACCGGAGTAAATCAAAAGGATCTACTAGAACGAAATCTACTGAAAGGAATCACTGCTGATGAAAATACTGCTGCCCATGATATTACCACTTTAGGTGTCATTAATGTAAGATATTGTGGTTATGTGGTCGTTGTGAAAGTTGAGGGTGGAGTTAACGAAAATATTGACTCTCCATCTCAACAAAATATTGAATTGTTTGATCAGCCAGAAGGTGGTGCCAACGCACTCAATATTAACAGTCTGAGATTACTTCTTCACAACACAACTCCATCTGAAAACAATAAACCAGTGACTCAGATACAAACGTTCGAGAGTGAAGAGCTTGGGGCTTCCCATGCTTCTGTGGAGAAGCTGATTAAAGAAAGTCTTGCTAAGCTTGAGAAAGAAGAACCAGGTATTGACTATTTTGTAAGATGGGAACTTGGAGCTTGCTGGATACAACATTTGCAAGACCAAAATAATACAGAAAAAGATAAGAAACCATCTTTGGAGAAGGCTAAGAATGAAATGAAGGTCGAGGGTCTCGGGAAACCTCTTAAAGCCCTAAAGAATTACAAAAAGAAATCTGATTCAAGCAGTACTAATTCTGCCTCTGAATATTCAAAATTTAATCTGGAGGCTGAAAGCCCTCCATTGGCCTCAATTGAATCCCAACATGAAACTACTGAAGCCGAGAATGAGCTTGTTCTGAAAAGAATGATATCTGAGGAAGCTTTTACCCAATTAAAAGAATCAGGAACTGGACTTCACTGCAAGTCTATCCATGATTTGATTGACTTATCACGAAAATATTACACAGATGTTGCTCTCCCAAAATTGGTCAAGCTTTCAGTAAAGCTTTCACATGTGCAATCGCTTTGTATTCATGAGATGATAGTTCGAGCTTTTAAGCACATCCTGCGGGCAGTAATTTCTTCTGTTGACAAGGAGAAAATGGCTTCATCAATTGCTGGTGCATTGAATTTGCTGCTCGGTATTCCTGAAAATAGAGAATCAGATAAATCACGTGAAGTTCACCCCTTGGTGTGGAAATGGCTAGAGTTGTTCTTGAAGAAGCGATTTGATTGGGATCTTAATAGGTTGAGTTATAAAGATGTGAGGAAATTTGCAATTTTACGTGGCTTGTGTCACAAGGTGGGAATTGAGCTTGTTCCAAGGGATTTTGATATGGATTCTCCAACTCCCTTCCACAAATCTGATATTGTCAGCCTGGTCCCTGTTCACAAGGCTACAATTTATCAACAAAAAGCTCTGGATATCAATGAGAGAGAGTTAGGTCTGGATCATCCTGATACGATGAAGAGCTATGGGGATCTTGCTGTTTTCTATTACAGACTTCAACACACAGAGCTGGCTCTGAAGTATGTGAAACGTGCTTTATATCTTCTGCATCTAACATGTGGCCCATCTCATCCAAACACTGCTGCTACTTACATTAATGTGGCTATGATGGAAGAAGGTCTGGGAAATGTACATGTTGCTCTCAGATATCTTCACAAAGCATTAAAATGCAACCAAAGATTACTTGGCGCAGATCATATTCAGACAGCTGCAAGTTATCATGCAATAGCAATAGCACTCTCATTGATGGAAGCATACCCATTGAGTGTGCAGCATGAGCAAACAACTTTGCAAATTCTACGGGCAAAACTTGGCCCCGATGACTTGCGCACACAGGACGCTGCGGCTTGGCTCGAGTATTTTGAGTCCAAGGCTTTTGAACAGCAAGAAGCTGCTCGAAATGGTACTCGAAAACCTGATGCATCAATAGCTAGCAAAGGCCATCTAAGTGTGTCAGATTTGCTTGATTACATTACTCCTAATCATGCTACTAAAGGGAGAGATGCAACAGCAAAGAGAAGAAGCCAGATAACAAAGGTGAGAGCAACATCCTATCAGAACATTGGCATGTCAAGTTCTGACGAGTCTTCAAAAGAAATTATGAAAGAGGCTTCAGATGAAGAGGTACAATTACAAATACATGTACCAGTAAGTAGTGCAGATTCTGAGCAAGAAAGCAACTCTGGACCTGATTTGGAACATACTATTTCAAAACAAATATCAGATGAAAAGCCACAAATTTATGATGAAATCTTGTCTGAAGCACATGCTGAAGGTGAGGATGGATGGCAACCAGTTCAAAGACCAAGATCAGCTGGCTCAAATGGTCGGAGACTAAAGCAGAGACGTGCAACACTTGGCAAAGTTTCTAGTCATCAAAAGAATGTGGAAGTTGGCTCAGAATCTCCTTTTACAAGGAGTGCCAATCCGAATAGTAGGTACTATTTTGTGAAGAAGCGGACAATTTCCCATGGGGGTTATACAGATGATCGTACTGTAAATATCACCCAAGGCTCTAAATTTGGAAGGAAAGTAGTCAAAGCTGTTACGTACAGGGTCAAGTCCGTGCCCTCAACTTCCAAGACTTCTGCAAATGAAACGTTAGAAAATGGTGAGAAGCTGTTGAGTTCTCTTTCAGCACCTGATCCAATTGATGTTAATCCAGTTAAGAATTCTATAGTTAGTCTTGGAAAGTCTCCTTCATACAAGGAAGTGGCCTTAGCTCCTCCAGGGACAATCTCCAAGTTTCAGGTCTATAATCCTCAAAGTGAGATTTCTGTTAGCTGTGAACATGATGGTGGCAAGCATGAAGAGGAAGATATTGAAGCTAATAGAAATGCTAATGTTATTTCAACCCCGACAGAGGTGAATGATATGGTTAAAGAGAACAATAATGATTCTTTATCAGATTCTGTAGATGATTCGCTGGATGATACTGAAATTGCTACTACTGAAGGGAAAGAGGAAACTCAGTTGATTGTTGCTGCGCAAGATAATCGTTTGAGTGCTGAGGGGCAATCAGGAGAAGTTGAGGCTGAAGTAGCAGTTGATAACAGCATATTGATTCATCCAGTAGATGATCATGTTGATTCTTACAAACAAGAGCTGGATGCAAGTAAGTCATCTGCCAGTGTAGAACCTAGTGATAATACAAATCCCATTTCCCAGGGTGGTGAGGATTTAAGGGCCAATGTATCACCATCAAGTCAGAGTCATGCCGGGGGCATCCCGTATAAGAAATTGTCTGCATCTGCAGCTCCATTCAACCCATCACCTGCCACTACACGTGCTGCACCAGTTGCCATGAATATGACTCTTCCTCCTGGTCCTAGTGCAGTTCCTGTAATTGGTCCCTGGCCAGTAAACATGAATGTTCATCCTGGACCTACTGTGCTACCCGCAGTTGCCCCGATGTGCTCCTCTCCCCACCATGCATATCCATCACCTCCAACAACACCAAACATGATGCAACCATTGCCATATATGTATCCTCCTTATACTCAACCTCAATCAATACCACCTAGCAACTTTCCAGTCACTAGTAGTGCCTTTCATCCTAACCATTTTACATGGCAATGTAATTTGAACCCTACAATATTAAAGTTTGGTCCCAATGCTGTTTGGCCAGGTTGTCATCCTGTGGAATTTTCTCTTCCGGTACCTATTGCTGAACCAATCCCTGATCCCATTTCAGAGTCACAAATTCTGTATCATGGTTCTGAAAGTCCAAGTTCAGCTTCAGTTCTTCCTGAGGACATTGATAATGTAAGCGATTCCAATAAAGTGGTAGAAACTTTAGCATCAGAGATAAGTGAAGATGAAGCAGTGAGAGCTGGTTCAGAAAGTATTGAAGAAAATGGTACTATGAATTTTCACGGGACTGAAAATACTGAAAATGCTGGAAACGAGCAAAATCAAAACATTGGTTCAAATGGCAACTCTAGCAGCAGTGAAACAAAAATGGATGGTGAGAAAACCTTCAGCATTTTGATTCGGGGAAGAAGAAATCGAAAGCAGACTCTGAGAATGCCAATAAGTTTGCTCACTCGACCTAATGGCTCACAGTCATTTAAGGTTAATTATAACCGTGTGGTTAGAGGAAGTCATGCTCCCAAGTCTATCAATTTGTCTTCTAGTAAAGATTGCACAGCTACTGCATAA 5148 0.4229 MAPRNSRGKPKGEKKKKEEKVLPVVIDITVKLLDETHVLKGISTDRIIDVRRLLSVNTETCYVTNFSFAHEVRGPHLKDTVDVSALKPCVLNLIEEDYDEEQAVAHVRRLLDIVACTTSFGPSSPAPPKNDSVSKSGKSEVPLEKQSAKDEAAIAAATADMDGEISHSCPNLENFYEFFSLSHLTAPIQYVKRGSRRRVEEILEEDYLFSLDVSILFEFCGAALGKGKLMSVKVCNGKVVHVEACRKGFYSVGKQRILCHNLVDLLRQLSRAFDNAFDDLLKAFSERNKFGNLPYGFRANTWLVPPVAAQPPSSFPPLPVEDETWGGNGGVKHVMEEPNFGCSVVENNIIYTERVGDLSINVLKDGSVASCKIDTKIDGVEATGVNQKDLLERNLLKGITADENTAAHDITTLGVINVRYCGYVVVVKVEGGVNENIDSPSQQNIELFDQPEGGANALNINSLRLLLHNTTPSENNKPVTQIQTFESEELGASHASVEKLIKESLAKLEKEEPGIDYFVRWELGACWIQHLQDQNNTEKDKKPSLEKAKNEMKVEGLGKPLKALKNYKKKSDSSSTNSASEYSKFNLEAESPPLASIESQHETTEAENELVLKRMISEEAFTQLKESGTGLHCKSIHDLIDLSRKYYTDVALPKLVKLSVKLSHVQSLCIHEMIVRAFKHILRAVISSVDKEKMASSIAGALNLLLGIPENRESDKSREVHPLVWKWLELFLKKRFDWDLNRLSYKDVRKFAILRGLCHKVGIELVPRDFDMDSPTPFHKSDIVSLVPVHKATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKRALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQRLLGADHIQTAASYHAIAIALSLMEAYPLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKAFEQQEAARNGTRKPDASIASKGHLSVSDLLDYITPNHATKGRDATAKRRSQITKVRATSYQNIGMSSSDESSKEIMKEASDEEVQLQIHVPVSSADSEQESNSGPDLEHTISKQISDEKPQIYDEILSEAHAEGEDGWQPVQRPRSAGSNGRRLKQRRATLGKVSSHQKNVEVGSESPFTRSANPNSRYYFVKKRTISHGGYTDDRTVNITQGSKFGRKVVKAVTYRVKSVPSTSKTSANETLENGEKLLSSLSAPDPIDVNPVKNSIVSLGKSPSYKEVALAPPGTISKFQVYNPQSEISVSCEHDGGKHEEEDIEANRNANVISTPTEVNDMVKENNNDSLSDSVDDSLDDTEIATTEGKEETQLIVAAQDNRLSAEGQSGEVEAEVAVDNSILIHPVDDHVDSYKQELDASKSSASVEPSDNTNPISQGGEDLRANVSPSSQSHAGGIPYKKLSASAAPFNPSPATTRAAPVAMNMTLPPGPSAVPVIGPWPVNMNVHPGPTVLPAVAPMCSSPHHAYPSPPTTPNMMQPLPYMYPPYTQPQSIPPSNFPVTSSAFHPNHFTWQCNLNPTILKFGPNAVWPGCHPVEFSLPVPIAEPIPDPISESQILYHGSESPSSASVLPEDIDNVSDSNKVVETLASEISEDEAVRAGSESIEENGTMNFHGTENTENAGNEQNQNIGSNGNSSSSETKMDGEKTFSILIRGRRNRKQTLRMPISLLTRPNGSQSFKVNYNRVVRGSHAPKSINLSSSKDCTATA 1715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1013 1073 - -
Aed2g0545 1715 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 792 1697 - -
Aed2g0545 1715 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 1 330 - -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1597 1651 - -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 121 148 - -
Aed2g0545 1715 SUPERFAMILY TPR-like 810 937 IPR011990 GO:0005515
Aed2g0545 1715 SUPERFAMILY Hypothetical protein c14orf129, hspc210 231 289 IPR023231 -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1365 1404 - -
Aed2g0545 1715 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 1 330 IPR027523 GO:0006996
Aed2g0545 1715 ProSiteProfiles Clueless (Clu) domain profile. 122 542 IPR025697 -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1363 1405 - -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 121 141 - -
Aed2g0545 1715 Pfam Tetratricopeptide repeat 791 842 - -
Aed2g0545 1715 Pfam Tetratricopeptide repeat 856 930 - -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1117 1134 - -
Aed2g0545 1715 Pfam Translation initiation factor eIF3 subunit 135 656 771 IPR033646 -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1044 1064 - -
Aed2g0545 1715 Coils Coil 528 548 - -
Aed2g0545 1715 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 792 1697 IPR027523 GO:0006996
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1612 1651 - -
Aed2g0545 1715 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 655 791 - -
Aed2g0545 1715 MobiDBLite consensus disorder prediction 1085 1134 - -
Aed2g0545 1715 Gene3D Tetratricopeptide repeat domain 777 1015 IPR011990 GO:0005515
Aed2g0545 1715 Pfam Mitochondrial function, CLU-N-term 44 114 IPR028275 -
Aed2g0545 1715 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 655 791 IPR027523 GO:0006996
Aed2g0545 1715 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT EIF-3 331 656 IPR027523 GO:0006996
Aed2g0545 1715 CDD CLU-central 654 772 IPR033646 -
Aed2g0545 1715 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 331 656 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0545 Aed-Chr2 3939609 3953888 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0545 K03255 - gmx:100808136 1545.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0545 2 3939609 3953888 Aed2g0545 2 3939609 3953888 ECH