Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0544 ATGGCAAATAGTAGATCTTGGACTCAGACATGGTCTTCTTTTTTCAGGCTATGTGTTCTGACTCTTGTATTAGATTTCAAAATCACAGCATTGGAGGATGGAAGTGTTGCAGCAGAAAACAGTTGCAAGAACACAAATTATCAAAGTTTCCTCCCTCCACCGTACCAGAATATTTCCCAAATGATATGCACACCTGTGTGGCACACCTATGAATTGAGGAATGGTGATACCACAACAATCATATTATCTGCTCCCTACACTATAGGGTGGGTAGGAATTGGATTTTCTAGAGATGGCATGATGGTTGGTTCAAGTGCAATGGTGGGATGGATTGGTAAACATGGTCATGCAAAAATCAAGCAATTTTACCTAAGGGGTAGGAAGTCATCAGAAGTCATAATAGACAAAGGTGAACTCCCCCTCAACAATATCCCTGCTGCTGTGGCTTCCAATGGAGCTCAAATTCATTTGGCTTTTCAGTTGAAGATGACAACCCCATTTCAGAAACAACCTATTTTGTTGGCTTTTGGTAGTAAATATCCACATAACAACCACCTCTCCAAGCATGAAGGCAATGTAGCTATTGTGTTTGATTTCTCTGCAGGTTCCACGGGTCATGTATCTGCTGTATCCAGTGAATTGATTCAGATGAGGACGAACCATGGAATTTTGGCTATAATAGGGTGGGGTCTGATCCTTCCTGTAGGGGCAATTATTGCTAGATATTTCAGGCACAAGGATCCCTTATGGTTCTATCTTCATGCAATCATTCAGTTTGTAGGATTCACATTTGGGCTTTGTACAGATTCGAAGATTCGAAAAATTTGGAATTGGTACCACAGTTGGTTTGGAAGGTTGGCACTTGTATTTGCAGCCATTAACATAGTGTTGGGGATGCAAGCTGCGGGGGCAGGAAGTGATTGGAAGATAGGCTATGGATTCGCCTTTGGTATTATGGTTGTTGCAGCTATTGTTCTTGAAGTATTGGCTTATTTCAAAAGATCAGAGATGCGTTCTCTACCACCTAACTTCCAATTGGATCCTCCTGTTGGAGGAGGAGCTACATTTCCAAGTAATCAACCACTTTCTTTCCTTTACATAGTTTTATTATATCATCTGTTTAGGGAAAATGGTGCTGAAAAGCAAAATGTTTTTAGTTAG 1161 0.4083 MANSRSWTQTWSSFFRLCVLTLVLDFKITALEDGSVAAENSCKNTNYQSFLPPPYQNISQMICTPVWHTYELRNGDTTTIILSAPYTIGWVGIGFSRDGMMVGSSAMVGWIGKHGHAKIKQFYLRGRKSSEVIIDKGELPLNNIPAAVASNGAQIHLAFQLKMTTPFQKQPILLAFGSKYPHNNHLSKHEGNVAIVFDFSAGSTGHVSAVSSELIQMRTNHGILAIIGWGLILPVGAIIARYFRHKDPLWFYLHAIIQFVGFTFGLCTDSKIRKIWNWYHSWFGRLALVFAAINIVLGMQAAGAGSDWKIGYGFAFGIMVVAAIVLEVLAYFKRSEMRSLPPNFQLDPPVGGGATFPSNQPLSFLYIVLLYHLFRENGAEKQNVFS 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0544 386 CDD Cyt_b561_FRRS1_like 198 328 - -
Aed2g0544 386 Gene3D - 193 268 - -
Aed2g0544 386 PANTHER MEMBRANE PROTEIN-LIKE 13 267 - -
Aed2g0544 386 SMART DOMON_3 90 177 IPR005018 -
Aed2g0544 386 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 269 346 - -
Aed2g0544 386 PANTHER MEMBRANE PROTEIN-LIKE 269 346 - -
Aed2g0544 386 SMART 561_7 220 299 IPR006593 -
Aed2g0544 386 ProSiteProfiles DOMON domain profile. 61 177 IPR005018 -
Aed2g0544 386 Pfam DOMON domain 70 165 - -
Aed2g0544 386 CDD DOMON_DOH 70 192 IPR045266 -
Aed2g0544 386 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 13 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0544 Aed-Chr2 3936320 3938838 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0544 - - gmx:100807608 612.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0544 2 3936320 3938838 Aed2g0544 2 3936320 3938838 ECH
Aed2g2660 2 28776937 28779219 Aed2g0544 2 3936320 3938838 PCT