Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0539 ATGCGCACACGTGTTCAGAAGATCGATCTCCATTCTCATGAAGACATGAACAACACTTCTCAGAAATACCTAGTTTCCTACGGCGACGGCTCCTTCACCTTCGGAGACTTCTCCACCGAAACCCTCACGTTCCGACGCGCTGCAGTCCCGCGCGTGGCCCTCGGCTGCGGCCACGACAACGAGGGACTCTTCGTGGGCGCCGCAGGTTTGTTGGGCCTCGGTCGCGGCGGCTTGTCGTTTCCTACCCAGGCTGGAACACTGTTCAACAACAAATTCTCTTATTGCTTAGCGGACCGAACCGCTTCTACTAAACCGTCTTCGCTTGTCTTTGGCGACTCGGCTGTCTCTCGAACCGCCCGGTTCACTCCTATAGTCAAAAACCCCAAACTCGATACCTTTTACTATGTTGAGCTTCTCGGGATTAGCGTTGGCGGCGCGCCGGTTCGAGGAATTTCGGCTTCGCTCTTTCGGCTCGACTCGACCGGGAACGGCGGGGTGATTATTGACTCGGGGACTTCCGTGACGCGACTCACGCGCCCTGCCTATGTGGCTCTCAGAGACGCGTTTCGGGTCGGGGCTTCGCACTTGAAGCGCGCGCCCGACTTGTCGCTTTTCGACACGTGTTTTGATCTTTCGGGGCTGTCGGAGGTTAAGGTTCCGACCGTGGTGTTGCATTTTCGAGGTGCTGACGTGTCCCTTCCGGCGTCGAATTATCTCATTCCGGTGGATAATGATGGGAGCTTCTGCTTTGCGTTCGCCGGAACGATGAGTGGGTTGTCTATTATTGGAAACATTCAGCAGCAAGGCTTTCGGGTTGTTTTTGACTTGGCGGGTTCTCAGGTCGGGTTTGCCCCGAAAGGCTGCGCGTGA 870 0.5621 MRTRVQKIDLHSHEDMNNTSQKYLVSYGDGSFTFGDFSTETLTFRRAAVPRVALGCGHDNEGLFVGAAGLLGLGRGGLSFPTQAGTLFNNKFSYCLADRTASTKPSSLVFGDSAVSRTARFTPIVKNPKLDTFYYVELLGISVGGAPVRGISASLFRLDSTGNGGVIIDSGTSVTRLTRPAYVALRDAFRVGASHLKRAPDLSLFDTCFDLSGLSEVKVPTVVLHFRGADVSLPASNYLIPVDNDGSFCFAFAGTMSGLSIIGNIQQQGFRVVFDLAGSQVGFAPKGCA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0539 289 PANTHER ASPARTYL PROTEASE FAMILY PROTEIN 2-LIKE 18 288 - -
Aed2g0539 289 Pfam Xylanase inhibitor C-terminal 134 284 IPR032799 -
Aed2g0539 289 Gene3D Acid Proteases 109 289 IPR021109 -
Aed2g0539 289 SUPERFAMILY Acid proteases 15 288 IPR021109 -
Aed2g0539 289 Gene3D Acid Proteases 4 108 IPR021109 -
Aed2g0539 289 Pfam Xylanase inhibitor N-terminal 12 112 IPR032861 -
Aed2g0539 289 ProSiteProfiles Peptidase family A1 domain profile. 1 284 IPR033121 -
Aed2g0539 289 PANTHER ASPARTYL PROTEASES 18 288 IPR001461 GO:0004190|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0539 Aed-Chr2 3910102 3911702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0539 23 288 Miscellaneous Gene Families AT1G77480 27.458 2.20e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0539 K22683 - gmx:100791511 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0539 2 3910102 3911702 Aed2g0539 2 3910102 3911702 ECH
Aed2g2665 2 28806135 28807737 Aed2g0539 2 3910102 3911702 PCT