Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0531 ATGCCACCTCAAATGCAGTCCTTCGGCGTTTTCCTCCGCACTCCGCCGCAGAACGACGGCTGGAACCCACCGCCGCCGCCGATGCCCACGGTGAAGAAGACACTAATAGTCGAAGACTCCTCCTTAGACAACCCGGATCTGGGCCCATTCCTTCTAAAGATGGCCCGAGAAACAATAGCTTCAGGTGAAAGCCCGGTAAAGGCCCTGGACTTGGCCATTCGGGCCTCCAAGTCATTCGAGCGGTGTGCGGGCCCGGGCCTGGAACTTGCCACGTGTCTCCACGTGGTTGCTGCGATCTACAGTAGTTTGGGGCGGTTGGACGAGGCGATTGAGGCCTTGGAAAGATCCATTTTGTTGCTGGATAGTGATAGTGAAAACGGGTCGGGTCATGACATGGCCCAGTTTTCCGGGTACATGCAACTTGGGGACACTTATTCCATGATTGGTCAGTTGGATAGGTCCATTAAGTGTTACGAGTCGGGTTTGAAGATCCAAATTGATGTGTTGGGTGAATCCGACCCGAGAGTTGCTGAGACTTGTAGGTACCTAGCTGAAGCTCATGTTCAAGCCATGCAATTTGACCAGGCAGAGAACTTCTGTAAAAAGACCCTTGAAATTCACAGGGAGCATTGCTCTCCTGCTTCCCTTACTGAAGCAGCCGACAGACGTCTAATGGCCCTTATATGTGAGGCAAAGGGAGACTATGAACCAGCACTTGAGCACCTTGTCTTAGCTAGCATGTCAATGATCGCCAATGCACAAGATAATGAGGTTGCAGCTATTGATGTTAGCATTGGAGACATTTACTTGTCACTCTGTCGTTTTGATGAGGCTGTTTTCGCCTATCAGAAGGCACTAACAGTGTTCAAATCCACCAAAGGTGAAAGCCACAGTTGTGTGGCATTAGTGTACATTCGCCTCGCTGACCTTTACTACAGGACAGGAAAATTAAGAGAGTCAAAATCATATTGCGAAAATGCCTTAAGAATATACAGTAAGCCTCTGGCTGGAACAACCGCTGGGGAGATTGCGAGTGGTTTGACTGAAATCTCTGCCATCTATGAAGCTCTAGATGAGCCCGAGGAGGCGCTGAAGCTGTTGCAGAAGGCAGCGAAGTTGTTGGAGGATATCCCTGGACAATATAGAACAGTGGCAGGAATAGAAGCTCAAATGGGGGTGATGTTCTACATGGTTGGGAAGTATATAGATGCTTGGAAGTCTTTTGAGAATGCTATCACCAAGCTGAGAGCAAGTGGGGAGAAGAAGTCTGTCTTTTTTGGAGTTGTATTGAACCAGATGGGGCTGGCATGTGTGCAACTGTATAAAATAGGGGATGCTGCCAAACACTTTGAAGAAGCAAGAGAGATATTGGAGAGAGAGTGTGGTACATATCATTCTGACACTCTTGGGGTGTATAGCAATCTTGCAGCAACTTATGATGCCTTGGGAAGAGTTGAAGATGCCATTGAGATATTAGAATACATACTAAAGATGAGAGAAGAAAAACTTGGAACTGCAAATCCAGATGTTGATGATGAAAAGAAGCGACTATTTGAGCTTTTGAAAGAAGCAGGAAGAGTTCGGAATAGAAAGGGGAAAAAATCACTTGAAAACCTTATAGATTCCAATTCCTTGAAGATGAAGAAGGAAGGAAAAAAAAGATGGGCTGCTTTTGGTTTGAGAACTTAA 1689 0.4671 MPPQMQSFGVFLRTPPQNDGWNPPPPPMPTVKKTLIVEDSSLDNPDLGPFLLKMARETIASGESPVKALDLAIRASKSFERCAGPGLELATCLHVVAAIYSSLGRLDEAIEALERSILLLDSDSENGSGHDMAQFSGYMQLGDTYSMIGQLDRSIKCYESGLKIQIDVLGESDPRVAETCRYLAEAHVQAMQFDQAENFCKKTLEIHREHCSPASLTEAADRRLMALICEAKGDYEPALEHLVLASMSMIANAQDNEVAAIDVSIGDIYLSLCRFDEAVFAYQKALTVFKSTKGESHSCVALVYIRLADLYYRTGKLRESKSYCENALRIYSKPLAGTTAGEIASGLTEISAIYEALDEPEEALKLLQKAAKLLEDIPGQYRTVAGIEAQMGVMFYMVGKYIDAWKSFENAITKLRASGEKKSVFFGVVLNQMGLACVQLYKIGDAAKHFEEAREILERECGTYHSDTLGVYSNLAATYDALGRVEDAIEILEYILKMREEKLGTANPDVDDEKKRLFELLKEAGRVRNRKGKKSLENLIDSNSLKMKKEGKKRWAAFGLRT 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0531 562 MobiDBLite consensus disorder prediction 1 24 - -
Aed2g0531 562 Gene3D Tetratricopeptide repeat domain 245 420 IPR011990 GO:0005515
Aed2g0531 562 Gene3D Tetratricopeptide repeat domain 53 244 IPR011990 GO:0005515
Aed2g0531 562 SUPERFAMILY TPR-like 90 505 IPR011990 GO:0005515
Aed2g0531 562 Pfam MalT-like TPR region 94 245 IPR041617 -
Aed2g0531 562 Gene3D Tetratricopeptide repeat domain 421 540 IPR011990 GO:0005515
Aed2g0531 562 SMART tpr_5 344 377 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 259 292 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 469 502 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 427 460 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 177 210 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 385 418 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 135 168 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 90 123 IPR019734 GO:0005515
Aed2g0531 562 SMART tpr_5 301 334 IPR019734 GO:0005515
Aed2g0531 562 PANTHER KINESIN LIGHT CHAIN-LIKE PROTEIN 33 562 - -
Aed2g0531 562 ProSiteProfiles TPR repeat profile. 259 292 IPR019734 GO:0005515
Aed2g0531 562 Pfam Tetratricopeptide repeat 258 332 - -
Aed2g0531 562 Pfam Tetratricopeptide repeat 429 501 - -
Aed2g0531 562 PANTHER PROTEIN KINESIN LIGHT CHAIN-RELATED 3 33 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0531 Aed-Chr2 3814307 3818768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0531 96 304 Glycosyltransferase AT3G04240 23.148 5.31e-06 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0531 - - gmx:100794697 1008.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0531 2 3814307 3818768 Aed2g0531 2 3814307 3818768 ECH