Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0515 ATGATCATTATGTCTCGTTACAACCCCATGTTCCTCGTAATCCTCAGTGTCGTCGTAGGTTTCACGATTCGGTGGTTTCTGTTCAAGACGGGATTGATACACGCCATTAAAAAACGCTTTGGAAGGGTCCTAGATTGGTTCCACGTGTACCAGTTCCTCAAAGTCCCCGAATTCAACGAAACCATGCAACGGAATTACCTTCACCGCAAAGTTTCTCTCTATTTGCATTCTCTTCCTTCAATAGAGGACGCTGACTTCACCAATCTCATTACCGGTGGTAATAACCAAAACGACATCGTCTTGCGCCTCGAGCCCAACCAAACCATCCAGGACCATTTCCTCGGGGCCACACTCTATTGGTTCAACCAAATAACCCAACCAAACCGGATTTCCACCTTTGTTCTCAAAATAAAAAAAAGAGATAAACGCCGCATCCTCCGCCAGTACCTCCGCCACATCAACACCGTCACCGACGAAATGGAGAAGCAAAGCAAACGCCATTTACGGTTGTTCATGAACGCCGCCACCGTCGAAGAAACACGCTGGAGATCCGTTCCGTTCACTCATCCGGCCACGTTCGAAACCATGGCGATGGAGAAGGATCTCAAGAACAAGATCAAATCAGATCTCGAATCGTTTCTCAAAGCGAAGCAGTATTACAGAAAACTCGGCCGCGTGTGGAAGCGGAGTTATCTCCTGTACGGTGCCTCCGGCACCGGAAAATCGAGCTTCGTCGCCGCGATGGCAAGTTTCCTCTGCTACGACGTGTACGATGTGGATCTCTCCAAGATTCGCGGCGATTCGGATCTGAAGATTCTGTTAACGGAAACGACGGCGAAGTCGATCGTTGTGGTGGAGGATCTGGACCGGTTTCTGGAATCGGAACTGGAATCGGAGTCGGCGGTTACCGCGTCGGGGATCCAGAGCTTCATGGACGGAATCATTAGCGCGTGTTGCGGCGAGGAGAGGGTGATGGTGTTCACGATGAACAGCAAGGACTGCGTGGACCCGAACCTGTTGCGACCAGGTCGGGTCGACGTGCACATCCACTTCCCGGTGTGCGATTTCTCGGCGTTCAAGACGCTGGCGAGCAGCTACCTCGGCGTGAGGGAGCACAAACTGTTCGCGAAGGTGGAGGAAATTTTCCGGCACGGCGCGAGTCTCAGCCCCGCTGAGATCGGCGAGCTGATGATCGCGAACCGGAACTCGCCGAGTCGCGCCATCAAATCGGTGATCGGGGCGCTGCAATCGGACGGTGAGGGGAAAAGGTACGCGGATGCGATTGGACGGCGGATAGAGGATGATGACGTGGACGAATCGCCCGGTGGTGCTGGTGATGGGGATGGCGTTTCCACGGTTAAGGATTTGCGGAAGTTTTACGGTTTCTTCAGATTGCGGAACGTCAGAAGAACTTCTCAACAACAGTCCAATGATCACGAAAGATGA 1446 0.527 MIIMSRYNPMFLVILSVVVGFTIRWFLFKTGLIHAIKKRFGRVLDWFHVYQFLKVPEFNETMQRNYLHRKVSLYLHSLPSIEDADFTNLITGGNNQNDIVLRLEPNQTIQDHFLGATLYWFNQITQPNRISTFVLKIKKRDKRRILRQYLRHINTVTDEMEKQSKRHLRLFMNAATVEETRWRSVPFTHPATFETMAMEKDLKNKIKSDLESFLKAKQYYRKLGRVWKRSYLLYGASGTGKSSFVAAMASFLCYDVYDVDLSKIRGDSDLKILLTETTAKSIVVVEDLDRFLESELESESAVTASGIQSFMDGIISACCGEERVMVFTMNSKDCVDPNLLRPGRVDVHIHFPVCDFSAFKTLASSYLGVREHKLFAKVEEIFRHGASLSPAEIGELMIANRNSPSRAIKSVIGALQSDGEGKRYADAIGRRIEDDDVDESPGGAGDGDGVSTVKDLRKFYGFFRLRNVRRTSQQQSNDHER 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0515 481 PANTHER BCS1 AAA-TYPE ATPASE 10 449 - -
Aed2g0515 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 411 IPR027417 -
Aed2g0515 481 CDD AAA 228 352 - -
Aed2g0515 481 Pfam ATPase family associated with various cellular activities (AAA) 232 352 IPR003959 GO:0005524|GO:0016887
Aed2g0515 481 MobiDBLite consensus disorder prediction 431 452 - -
Aed2g0515 481 Gene3D - 181 353 IPR027417 -
Aed2g0515 481 PANTHER BNAC04G00800D PROTEIN 10 449 - -
Aed2g0515 481 Pfam Domain associated at C-terminal with AAA 29 120 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0515 Aed-Chr2 3683662 3685107 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0515 192 346 Miscellaneous Gene Families AT5G58870 28.235 2.98e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0515 - K08900 gmx:100787809 795.423
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0515 2 3683662 3685107 Aed2g0515 2 3683662 3685107 ECH
Aed2g2683 2 28917148 28918503 Aed2g0515 2 3683662 3685107 PCT