Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0500 ATGCAGCAGACACCGTCTATGATTCCTATGATGCCTTCGTTCCCACCTACCAACATAACCACTGAGCAGATTCAAAAATACCTTGATGAGAACAAGAAGCTGATTCTGGCAATATTGGACAATCAAAATCTTGGAAAACTTGCAGAATGTGCCCAGTACCAAGCTCAGCTTCAAAAGAATTTGATGTATTTAGCTGCAATTGCTGATGCCCAGCCTCAAACCCCAGCCATGCCTCCACAGGCTGCTCTTGGAGGCGGCAACAGTGGTGGTCCACCTTCGGCTACTGGTCCAAACGATGCACGTGGTGTAAGCAAGCAAGATGCTTCTGAGGCCGGAACAGCTGGTGGAGACGGCCAAGGCAGCTCTGCGGCTGCTCATAACAGTGGAGATGGTGAAGAGGCAAAGTGA 408 0.4975 MQQTPSMIPMMPSFPPTNITTEQIQKYLDENKKLILAILDNQNLGKLAECAQYQAQLQKNLMYLAAIADAQPQTPAMPPQAALGGGNSGGPPSATGPNDARGVSKQDASEAGTAGGDGQGSSAAAHNSGDGEEAK 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0500 135 MobiDBLite consensus disorder prediction 74 135 - -
Aed2g0500 135 Pfam SSXT protein (N-terminal region) 18 74 IPR007726 -
Aed2g0500 135 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 1 94 IPR044779 GO:0003713
Aed2g0500 135 PANTHER TRANSCRIPTION FACTOR SSXT FAMILY-RELATED 1 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0500 Aed-Chr2 3530959 3534192 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0500 - - gmx:100804074 145.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0500 2 3530959 3534192 Aed2g0500 2 3530959 3534192 ECH