Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0485 ATGGCAACATTGACTGCTTCAAGTAACTTAGTTTCTAGAAATTCTCATGTCCACCATGGACCAACAACTGCTTCATATGAATCTAAAGCAGTAGCAATGGGACTTAGATCTCTAAATACTCATAGTGGACTAAGAATTTTGAACCCGGTGGATGAGCTTCTTAGCAGAACCCCAATTAAGAGCAATGCAGTGCAAGCTATTCGGAAGGGACCTCAAAGCAAGAATGTGAGGCCTAAAGGTATAGTCACATGTGGCATGACTTTCGTAATTATAGGAACGGAGGTGGCTCCATGGTGCAAAACTGGTGGCTTAGGAGATGTTCTTGGAGGTCTTCCACCAGCATTGGCAGGTTTCGGCCATCGAGTAATGACTATCGTGCCGCGCTATGACCAGTACAAAGATGCATGGGATACAAGTGTTGAAATTGAGTTGAAAGTAGGAGATAGAACAGAAAAGGTGCGGTTCTTCCATTGCTATAAGAGGGGAGTTGATCGCGTCTTTGTGGATCACCCTTGGTTTCTTGAAAAGGTCTGGGGGAAAACTGGAACCAAACTTTATGGACCAACTACAGGAGATGATTACGAAGACAACCAACTGCGTTTTAGCCTCTTTTGCCAGGCTGCTTTGGAAGCCCCAAGGGTTCTGAGTCTTAATTCCAGTAAATATTTCTCTGGACCATATGGTGAAGATGTCATTTTCGTCGCCAATGATTGGCACACTGCCCTTATCCCCTGCTACTTGAAAAGTATGTACCAGTCAAGGGGCATCTATCTGAATGCCCGGGTTGTTTTCTGTATCCACAACATTGCTTACCAAGGAAGATTTGCATTCGCCGACTTTGCACTTCTAAATCTCCCAGACCAATTTAAGAGCTCCTTTGACTTTCTTGATGGGCATGTTAAACCAGTGGTTGGAAGGAAAATCAATTGGCTGAAAGCTGGACTTATAGAATCATGGTTTGTGATAACTGTTAGTCCAAACTATGCTAAAGAACTGGCATCAGCTCCAGACAAAGGAGTGGAATTGGACAACATCATTCGCAAAATTGATGATGATGGTCGTTTGGTTGGAATTGTGAATGGCATGGATGTTCAGGAGTGGAATCCAACCACTGACAAATATTTAGCTGTCAAATATGATGTTTCAACAGTATTGGAAGCAAAGGCTCTTCTGAAAGAAGCCCTCCAAGCAGAAGTTGGATTGCCGATCGACAGAAATATTCCTCTCATTGGTTTCATTGGTAGGCTTGAAGAGCAAAAAGGTTCTGATATTCTTGCAGAAGCCATTCCCCAATTTATCAAGGAGAATGTTCAGTTGGTAGCCCTAGGAACAGGAAAAAAACAAATGGAAAAACAGATTGAGGAACTTGAAATATCATACCCTGACAAGGCCAGAGGAGTGGCAAAATTCAATGTTCCCCTAGCCCACATGATAATTGCTGGAGCTGATTTTATATTGGTTCCTAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTACAAGCTATGCGCTATGGATCTGTACCAATTGTTGCCTCAACAGGTGGATTAGTTGACACTGTCAAAGAAGGTTTCACTGGATTTCAGATGGGTGACTTCAATGTTGAATGTGATGCTGTGGATCCAGCTAATGTGGATGCTATAGCAAAGACTGTCAAAAGTGCCCTTGCGGTCTATGGAACTCCAGCTTTTACAGAAATGATCAAGAACTGTATGGCTCAAGATCTTTCATGGAAGGGACCTGCTAAGAAGTGGGAGGAAGTACTGCTAAGCTTGGGAGTTCCTGGCAGTGAACCTGGAAGTGATGGAGAAGAAATTGCTCCTCAGGCAAAGGAAAATGTGGCAGCACCATGA 1851 0.4338 MATLTASSNLVSRNSHVHHGPTTASYESKAVAMGLRSLNTHSGLRILNPVDELLSRTPIKSNAVQAIRKGPQSKNVRPKGIVTCGMTFVIIGTEVAPWCKTGGLGDVLGGLPPALAGFGHRVMTIVPRYDQYKDAWDTSVEIELKVGDRTEKVRFFHCYKRGVDRVFVDHPWFLEKVWGKTGTKLYGPTTGDDYEDNQLRFSLFCQAALEAPRVLSLNSSKYFSGPYGEDVIFVANDWHTALIPCYLKSMYQSRGIYLNARVVFCIHNIAYQGRFAFADFALLNLPDQFKSSFDFLDGHVKPVVGRKINWLKAGLIESWFVITVSPNYAKELASAPDKGVELDNIIRKIDDDGRLVGIVNGMDVQEWNPTTDKYLAVKYDVSTVLEAKALLKEALQAEVGLPIDRNIPLIGFIGRLEEQKGSDILAEAIPQFIKENVQLVALGTGKKQMEKQIEELEISYPDKARGVAKFNVPLAHMIIAGADFILVPSRFEPCGLIQLQAMRYGSVPIVASTGGLVDTVKEGFTGFQMGDFNVECDAVDPANVDAIAKTVKSALAVYGTPAFTEMIKNCMAQDLSWKGPAKKWEEVLLSLGVPGSEPGSDGEEIAPQAKENVAAP 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0485 616 CDD GT5_Glycogen_synthase_DULL1-like 89 590 - -
Aed2g0485 616 Hamap Glycogen synthase [glgA]. 86 591 IPR011835 GO:0004373
Aed2g0485 616 PANTHER GRANULE-BOUND STARCH SYNTHASE 1 616 - -
Aed2g0485 616 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 86 589 IPR011835 GO:0004373
Aed2g0485 616 MobiDBLite consensus disorder prediction 1 23 - -
Aed2g0485 616 Pfam Starch synthase catalytic domain 89 348 IPR013534 -
Aed2g0485 616 Gene3D Glycogen Phosphorylase B; 89 582 - -
Aed2g0485 616 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 17 588 - -
Aed2g0485 616 MobiDBLite consensus disorder prediction 593 616 - -
Aed2g0485 616 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 1 616 - -
Aed2g0485 616 MobiDBLite consensus disorder prediction 1 22 - -
Aed2g0485 616 Pfam Glycosyl transferases group 1 404 528 IPR001296 GO:0016757
Aed2g0485 616 Gene3D Glycogen Phosphorylase B; 363 573 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0485 Aed-Chr2 3390574 3395195 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0485 1 616 Glycosyltransferase AT1G32900 68.285 0.0 844
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0485 K13679 - gmx:100037476 1167.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0485 2 3390574 3395195 Aed2g0485 2 3390574 3395195 ECH