Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0484 ATGGAGCTCGACCTCCGTTCATTCCTTCACTCTCCCACCTCCAGCTCCTCCTCCGACGCCGACGACGATGCCGACGACGTTGCTCCTCACCGCAGCATCGATGATATTCTCAACGACTGTGACACTTCCTCTTCCTCACCCTCACCCTCACCCTCCCCTCCTTCTTCTCCCTCTCACTCCCTCACCACTAATTCCCATCCTCAAAACCCTACACTCCAACAAAAACCACTCCAACCCCCACCCGATTCGTTTTCCCGGGTCAGACCCGCTGATTTCTCCGAGCGCACACGCGTTTCACGCCCTTTCTCCTCTCTCCTCCACGGCGTTAGGTCCAATGCCAAGCCCGGCGCGGCCCTCGCCGCGGCGGTGGCGGCGTCTCGATCCGTTCCTACGCCGCACCTGGCGGCGATCATCTCCAGGAGGAAATCCGCGGCCGCGAACAGTGTCGAATCGAGTTCGATCGCTGCCACCGGCGACGATTGTTCCGATGTTTCTTCCAAAGGCGAATTGGGCGAGCCTAGCGAAAAATTTGATCCAGTGCCTCCGAAAATCGAGACTCCGTCTAGTGAAAGTGCTTCTGCTATTGGTGAACGTTTTGAGAGTGATGCGGAAATTGCCACTGATTTGAAGGCTGGCAGTGGTGATATTCAAGTGCACAGTGATAATAATATTAATAATAATGCTAATGCTAATGATGATGATGATGATGATGATGATGATAAGGATTCTTCTATCGTGAGTGACGAGAAGAGGGATTTAGATGAGGTTGACATTGACCATGAGAAGGATATGAATTCTGCACCGTTTGATGGAAATGATGGTGGTGATGAGAGAATCGCAGCTACGGATGCAGCTGTGGAAACAGAAGAAGTGGTGAATAATGGTAGTAGTTCTATGGAAGATGTTAGGAATGAGCCGAGTGTTGGTGATGACGAGGGTAGTTCATTAAGTGATGTTGCTGAGCTAGTGGAAGAGAGGCTTGAGGAATTGGAAAGCAGAAGGGCTGCTAAGAGAGCTGAGAAGAAACGAGAGTCTTCGATGAAGCCGCTTGAATTGGCTGAGGAACTGGAGAAGAAGCGTGCTTCAACTGGTTTACATTTGGAAGAGGGTGCTGCTGCCCAGCCAATGAGGCTTGAGGGCGTTCGAAGAGGCTCCACGATGTTGGGATACTTTGATGTTGATGCCGATAATGCTTTCGCGAGGGCCATTTCGTCCCAAACGTTCAGGCGTGAACAAGGTTCCGCCAGAGCCTTAGCAGTTCATGCAAATTACATTGCAGTAGGAATGTCAAAAGGACTCATTGTTGTGATTCCCAGTAAATATTCCATTCATCACGCTGACAACTCTGATGGAAAGATGTTGATGCTTGCTATACAAGGTGATCGGTTGCATGCTCCAGTGACATCCATGTCTTTCAATCAACAAGGAGACCTTCTTTTAGCTGGTTACGGGGATGGTCATCTTACACTGTGGGATGTGCAGAAAGGGGTAGTTGCAAAAGTTATTAGTGGTGAGCATACAGCACCAGTAGTGCATACGTTGTTTCTAGGACAGGATCCTCAGAATACTCGTCAATTTAAAGCAGTTACTGGTGATTGTAAGGGTCTGGTTCTCTTGCACATGATCTCAGTGGTTCCTTTGTTCAGTAGATTCTCCATCAAAACTCAGTGTCTTCTTGATGGGCAAAGCACGGGCTTGGTGCTTTCAGCTTCACCACTCCTTTTTGATGACTTCAGTGGAAGTGCTTTGCCTTTTACCCAGGGAACCACCTCAGCTCCAGCCAGCAGTATAAGCAGCATGATGGGAGGTGTTGTTGGCGGAGATGCAGGTTGGAAACTCTTCAATGAAACCCCTTCTTTGGTTGAAGAAGGTGTGGTTGTATTTGTCACCCATCAAACTGCTTTGGTGGTACGGTTGAGCCCTACATTGCAAGTCTATGCTCAACTCTCTAGGCCTGATGGAGTTCGGGAGGGTTCCATGCCATATACTGCATGGAAATACATGACACAAACATGTAGTTCTACTGAAAATATGTCTGCAGAAGCTGTTGAAAGAGTTTCATTGCTTGCAATTGCTTGGGAAAAGAAGGTTCTGGTTGCAAAGTTGGTCAAATCAGAATTAAAAGTATATGGAAGATGGTCTCTTGATGGTGCGGCTATAGGTCTAGCATGGTTGGATGATCAGATGCTGGTAGTTCTCACTTCAAGTGGACAACTGTATTTATTTTCCAAGGATGGAACTGTGATTCACCAAACAAGTTTTGCCGTAGATGGTATTGGAGGAGATGATCTAGTCTCTTATCATACTCATTTCATCAATATATTTGGAACTCCTGAGAAAGCTTATCATAACTCTGTTGCTGTAAGAGGAGCTTCTATTTATATACTTGGTCCAACACATCTTCTTGTTTCTCGTCTTCTCCCTTGGAAAGAGCGTATTTCTGTTTTGCGGAAAGCAGGTGACTGGATGGGTGCCTTGAACATGACAATGACTCTTTATGATGGCCATGCTCATGGAGTTGTTGACCTTCCCAGAACCTTGGATGCTGTACAAGAGGCCATAATGCCCTTTTTGGTGGAGTTGCTCACATCATATGTTGATGAAGTGTTCTCTTATATTTCGGTGGCATTCTGCAACCAAATTGGAAAAATGGACCAATCCAATGATTCAAATAGTAGAAGCAATTCAGTGCATTCTGAGATAAGGGAGCAGTATGCTCGTGTTGGTGGAGTTGCTGTTGAATTTTGTTGCCATATCAAACGGACGGACATTCTTTTTGATGAAATTTTCTCCAAGTTCGTGGATGTTCAACAGAGAGAAACATTTTTGGAGCTTCTGGAGCCATATATTTTGAAGGATATGCTTGGATCTCTACCTCCCGAGATTATGCAAGAACTGGTAGAGTATTATAGCACCAAAGGGTGGTTACAGCGGGTTGAGCAATGTGTACTTCACATGGATATATCATCCTTGGATTTTAATCAGGTTGTCAGATTATGCCGGGAGCATGGACTATATAGTGCCCTGGTGTATGTCTTCAATAAAGGATTAGATGATTTTAGGGCACCTCTGGAGGAGCTGTTTGCTGTCTTACAAAATAGCCAAAAGGAAAGTGCTACTGCACTTGGGTATCGAATGCTGGTTTATCTTAAGTACTGCTTTACAGGTCTTCCCTTTCCACCTGGCCGTGGAACTATTCCTCCCACACGCTTACCATCTCTTAGAAGAGAACTTGTAGAGTTTTTGTTAAAGGACTCCTGTACTCAGAAATCACACACAGTTTCAGATTCTGTGTCCAGACGACCCCACCTGAATCTTTATCTTCTCTTAAGGTTAGACACTGAAGCTACATTAGACGTCCTCAGATGTGCTTTCATGGAAGATGTAGTTTCAAATGCCAGCTCATCTTCACCGGATTCAGCCAATAAACCTGTAGAGGAAGCAGAAAAGGAAAATGATAATGTTACTGAAACTCAAAATGCTTTGGTTCAGAACACAGTTGACGCTCTCATTCAAATAATTGATATGAATATTGTTCCCACAGATACAATCCCTAGTAGTGGTGATGATGGGTTGATAAAAGAGTGGCCCTCCAAGGACATAGGTTATTTGTTTGAGTTCATTGCATATTATGTTGCTCTCCAAAGGGCTAAGATTTCAAAGGGTGTGCTTTGTCAAATATTGGAATATTTGACATCAGATAGTCACTTTTCAACTAATGTTTCTGTTCATGGTTCAACTCCCAAAAATAGAGAGAAGCAAGTGCTTGCACTTTTGGAAGTACTTCCTGAGTCAGACTGGGATGCATCGTTTGCACTAGATCTATGTGAGAGAGCCAAATATCATCAGGTTTGTGGATTGATTCATAGTATCAGACATGAATATGTGGCCGCATTGGATAGTTATATGAAAGATGTAGATGAGCCTGTTCATGCCTTCTCCTTTATTAACAATGCATTCTCACAGTTGACTGACAATGACCATGCAGCTTTTCGGTCAGCAGTCATATCGCGGATTCCTGAGTTGGTTGAACTAAGCAGGGAGGGTGCGTTCCATATGGTTATCAGTCATTTTAGTGATGAAAGTTCCCGTATCATAACTGAACTTCACTCTCATCCAAGAAGTCTTTTCCTTTATTTAAAGACACTCATTGAGCTTCACTTATTTGGCACCCTAGACTTGTCTAATTTGAGAAAGGATGATACTATGAATCCCCTTAATGGAAGGCAGGTTAAGGATCACCCACAAGGAATCAGAGATTACTTAGAGAATATATCTAACTTCCCCAAATACATGCGTGAAAATCCTATTCAGGTGCCTGATGATCTTATTGAGCTTTACCTTGAGTTATTATGCAAGTACGAAGGTGGTTCAGTTCTCAAGTTTCTGGAAATGTTTGACAGCTATCGAGTTGAACATTGTTTACGCCTGTGCCAAGAATATGGCATTATAGATGCATCTGCATTCTTATTAGAAAGGGTTGGTGATGTTGGTAGTGCTCTTTCACTTACACTTTCTGATCTAAATAATAAGTTTGTTGAGCTTGATGCTGCTGTGGAAGCTGTAGTTTTAAACCATCGCAGAGTTGGTTCTTCACATATGGAAGTATTCAACAGTGTTTTAAGAACAAAGGAGGTAAGTGATATCCACAATATATTGCGTGCCTGTATTGGTCTGTGTCAGCGGAACACCCCTCGTCTAAATCCTGAGGAGTCAGAAGCACATTGGTTTAAATTACTTGACTCGTTTTGTGACCCATTGATGGATTCAAATGTTGAAGAAAGAGCATATGAAACTAAAAATTATTTTGGAATGCTAACTGGATCAGCAGATTCACCACAGGACAAAGACACCCATAAAAGCAGTTGGAAATTTTCAAAGTCCCGGAATGGTCATATCTTGAAAAAATTGCTATCCCAGTTCATTAAAGAGATTGTTGAGGGAATGATTGGTTTTGTTCACCTTCCAACTATCATGTCTAAACTCCTGTCTGATAATGGTAGTCAAGAATTTGGTGATTTTAAACTTACCATATTGGGAATGCTGGGAACATATGGCTTTGAAAGAAGAATTCTGGATGCTGCCAAATCGTTAATAGAGGATGATTCTTTTTATACTATGAGTTTACTCAAAAAAGGGGCCTCCCATGGATACGCTCCCAGGAGTCTTGTGTGCTGTGTTTGTAATTGCCCCCTTACAAAGAACTCTGTTAGCTCTGGAATTCGGATTTTCAACTGTGGCCATGCAATTCATCTCCAATGTGAAGTTTCAGAAATTGAGGGATCAAGCAGAGCATCTTCATCTGGATGCCCTGTATGCATGCCTAACCAGAAATCTCAGCAGTCTAGAAACAAATCAATTGTTGCAGCAAATGGCTTGGTCAATAAATTCTCATCAAGGCGCCAATATCCTCATGGAAGTTCCATTCATCCTCATGACAGTGATTTATCAGATAATATGTATGGACATCAACAGATATCACGGTTTGAGATCTTGAGCAGCTTACAGAAGAATCAAAGATTTATGCAAATAGAAAACTTGCCTCCATTGAAGCTTGCCCCACCTGCTGTGTACCATGAAAAGGTAAGTAAAGTGGCAAACTTTCTGACAGGCGAAAGTAGCAATACTTCTGCTGCAATTGAGAAACAAAGTAAAAACAAGCAAAATCGGGAGCTGAGAGTTAAGGGTTCATCAATTCGATTTCCTTTAAAATCAAGTATATTTGGCAAGGAGAAGACAAATAAGCGATGA 5751 0.4314 MELDLRSFLHSPTSSSSSDADDDADDVAPHRSIDDILNDCDTSSSSPSPSPSPPSSPSHSLTTNSHPQNPTLQQKPLQPPPDSFSRVRPADFSERTRVSRPFSSLLHGVRSNAKPGAALAAAVAASRSVPTPHLAAIISRRKSAAANSVESSSIAATGDDCSDVSSKGELGEPSEKFDPVPPKIETPSSESASAIGERFESDAEIATDLKAGSGDIQVHSDNNINNNANANDDDDDDDDDKDSSIVSDEKRDLDEVDIDHEKDMNSAPFDGNDGGDERIAATDAAVETEEVVNNGSSSMEDVRNEPSVGDDEGSSLSDVAELVEERLEELESRRAAKRAEKKRESSMKPLELAEELEKKRASTGLHLEEGAAAQPMRLEGVRRGSTMLGYFDVDADNAFARAISSQTFRREQGSARALAVHANYIAVGMSKGLIVVIPSKYSIHHADNSDGKMLMLAIQGDRLHAPVTSMSFNQQGDLLLAGYGDGHLTLWDVQKGVVAKVISGEHTAPVVHTLFLGQDPQNTRQFKAVTGDCKGLVLLHMISVVPLFSRFSIKTQCLLDGQSTGLVLSASPLLFDDFSGSALPFTQGTTSAPASSISSMMGGVVGGDAGWKLFNETPSLVEEGVVVFVTHQTALVVRLSPTLQVYAQLSRPDGVREGSMPYTAWKYMTQTCSSTENMSAEAVERVSLLAIAWEKKVLVAKLVKSELKVYGRWSLDGAAIGLAWLDDQMLVVLTSSGQLYLFSKDGTVIHQTSFAVDGIGGDDLVSYHTHFINIFGTPEKAYHNSVAVRGASIYILGPTHLLVSRLLPWKERISVLRKAGDWMGALNMTMTLYDGHAHGVVDLPRTLDAVQEAIMPFLVELLTSYVDEVFSYISVAFCNQIGKMDQSNDSNSRSNSVHSEIREQYARVGGVAVEFCCHIKRTDILFDEIFSKFVDVQQRETFLELLEPYILKDMLGSLPPEIMQELVEYYSTKGWLQRVEQCVLHMDISSLDFNQVVRLCREHGLYSALVYVFNKGLDDFRAPLEELFAVLQNSQKESATALGYRMLVYLKYCFTGLPFPPGRGTIPPTRLPSLRRELVEFLLKDSCTQKSHTVSDSVSRRPHLNLYLLLRLDTEATLDVLRCAFMEDVVSNASSSSPDSANKPVEEAEKENDNVTETQNALVQNTVDALIQIIDMNIVPTDTIPSSGDDGLIKEWPSKDIGYLFEFIAYYVALQRAKISKGVLCQILEYLTSDSHFSTNVSVHGSTPKNREKQVLALLEVLPESDWDASFALDLCERAKYHQVCGLIHSIRHEYVAALDSYMKDVDEPVHAFSFINNAFSQLTDNDHAAFRSAVISRIPELVELSREGAFHMVISHFSDESSRIITELHSHPRSLFLYLKTLIELHLFGTLDLSNLRKDDTMNPLNGRQVKDHPQGIRDYLENISNFPKYMRENPIQVPDDLIELYLELLCKYEGGSVLKFLEMFDSYRVEHCLRLCQEYGIIDASAFLLERVGDVGSALSLTLSDLNNKFVELDAAVEAVVLNHRRVGSSHMEVFNSVLRTKEVSDIHNILRACIGLCQRNTPRLNPEESEAHWFKLLDSFCDPLMDSNVEERAYETKNYFGMLTGSADSPQDKDTHKSSWKFSKSRNGHILKKLLSQFIKEIVEGMIGFVHLPTIMSKLLSDNGSQEFGDFKLTILGMLGTYGFERRILDAAKSLIEDDSFYTMSLLKKGASHGYAPRSLVCCVCNCPLTKNSVSSGIRIFNCGHAIHLQCEVSEIEGSSRASSSGCPVCMPNQKSQQSRNKSIVAANGLVNKFSSRRQYPHGSSIHPHDSDLSDNMYGHQQISRFEILSSLQKNQRFMQIENLPPLKLAPPAVYHEKVSKVANFLTGESSNTSAAIEKQSKNKQNRELRVKGSSIRFPLKSSIFGKEKTNKR 1916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0484 1916 MobiDBLite consensus disorder prediction 1873 1896 - -
Aed2g0484 1916 Pfam Region in Clathrin and VPS 1442 1510 IPR000547 GO:0006886|GO:0016192
Aed2g0484 1916 SUPERFAMILY RING/U-box 1718 1776 - -
Aed2g0484 1916 MobiDBLite consensus disorder prediction 165 179 - -
Aed2g0484 1916 MobiDBLite consensus disorder prediction 244 267 - -
Aed2g0484 1916 Gene3D - 384 543 IPR015943 GO:0005515
Aed2g0484 1916 MobiDBLite consensus disorder prediction 144 160 - -
Aed2g0484 1916 Pfam Golgi CORVET complex core vacuolar protein 8 941 1125 IPR025941 -
Aed2g0484 1916 MobiDBLite consensus disorder prediction 57 72 - -
Aed2g0484 1916 ProSitePatterns Trp-Asp (WD) repeats signature. 479 493 IPR019775 -
Aed2g0484 1916 CDD RING-H2 1725 1774 - -
Aed2g0484 1916 Coils Coil 320 347 - -
Aed2g0484 1916 PANTHER VACUOLAR PROTEIN SORTING VPS41 285 1844 IPR045111 GO:0006623
Aed2g0484 1916 Coils Coil 1145 1165 - -
Aed2g0484 1916 MobiDBLite consensus disorder prediction 23 37 - -
Aed2g0484 1916 MobiDBLite consensus disorder prediction 1 100 - -
Aed2g0484 1916 PANTHER - 285 1844 - -
Aed2g0484 1916 MobiDBLite consensus disorder prediction 289 303 - -
Aed2g0484 1916 MobiDBLite consensus disorder prediction 1132 1156 - -
Aed2g0484 1916 SUPERFAMILY WD40 repeat-like 406 741 IPR036322 GO:0005515
Aed2g0484 1916 MobiDBLite consensus disorder prediction 143 318 - -
Aed2g0484 1916 ProSiteProfiles Zinc finger RING-type profile. 1725 1773 IPR001841 -
Aed2g0484 1916 ProSiteProfiles Trp-Asp (WD) repeats profile. 467 501 IPR001680 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0484 K20178 - gmx:100780869 3283.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0484 2 3378745 3388493 Aed2g0484 2 3378745 3388493 ECH