Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0478 ATGGCTTCAACCTCTTCTGCTCTCACTATATCATCTTCTTCCTCCCTTGTTGATGGCAAGGCTCCAAGACAGTCACCAACTGCTTCTCCACAATGTGTGAGCCTTCCCTCTCCACCTTTGCACTCTCAGAACCGTTCATGGAAGACCACTGCTTATTCTGAAGCTGCCCCAACTGAGGTGCCAGAGATTGTCAAGACTCTTCAAGAAACTTGGGACAAAGTTGATGATAAGTATGCAGTGAGTTCACTGGCCCTGATTGGGGTGATTGCATTGTGGGGTTCAGCTGGATTGATCTCAGCAATTGATAGGCTTCCTTTGATTCCTGGGATTCTTGAGATTGTAGGCATTGGATATACTGGGTGGTTTGTATATAAGAACATAGTTTTCAAGCCAGACAGGGAAGCTTTGGTACAAAAAGTAAAAGACACATACAATGACATACTCGGGAGCAACTGA 456 0.4518 MASTSSALTISSSSSLVDGKAPRQSPTASPQCVSLPSPPLHSQNRSWKTTAYSEAAPTEVPEIVKTLQETWDKVDDKYAVSSLALIGVIALWGSAGLISAIDRLPLIPGILEIVGIGYTGWFVYKNIVFKPDREALVQKVKDTYNDILGSN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0478 151 MobiDBLite consensus disorder prediction 1 52 - -
Aed2g0478 151 Pfam CAAD domains of cyanobacterial aminoacyl-tRNA synthetase 65 149 IPR025564 -
Aed2g0478 151 PANTHER - 1 150 IPR033344 GO:0009579
Aed2g0478 151 PANTHER PROTEIN CURVATURE THYLAKOID 1B, CHLOROPLASTIC 1 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0478 Aed-Chr2 3333890 3335941 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0478 - - gmx:100306403 265.388
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0478 2 3333890 3335941 Aed2g0478 2 3333890 3335941 ECH