Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0465 ATGGTGAAGACGTGTGGGTTGCGTAACAAAGTTGTGGCTGCAGGTGGGAAGTTCAATTTGAGAAGAGGGAATGGTTCTTCTCATAATGTTGTCAATGGTTATAGCAGTGATGGAGATCTTTGCAGAATTAATAAGAGTGAGCGTTTTTCGTCAGTGGCAGAGGTGGATAGAGATCCTTTTTGTGTTTCATTCACCACTTTCAACATTCTGGCTCCGATTTTCAAACGGATTGACCCACAGAACCAAGACCGACGAGAAAGTGACTGCAGACCATTCTGGTTGACCAGGAATGAGAGGATTCTCAATTCCTTGCTTTCTGAATCATCTTCCATTATGTGCCTCCAGGAGTTTTGGGTTGGAAATGAAGAACTTGTTAACATGTATGAGGAGAGACTCGGGGATGCTGGCTACCATCTCTTCAAGCTCGCTCGAACCAACAATCGCGGAGATGGTCTGCTGACTGCTATACGTAAAGAATGTCTAACAGTTGTGGATTATGGAGAGTTGCTTTTTAACGATTGTGGTGATCGCGTTGCTCAGTTGTTACATGTTCAGTCAGTTGCCCCCTACCAAAAAGGCAGTGTTCCCCAAGAGTTTCTGATTGTGAACACTCACTTGTTATTTCCTCATGATTCAAGTTTGTGCATAGTGAGATTGAACCAGGTTTACCAAATATTGCAACATGTGGAATTGTATCAGAGAGACAACAGGCTCAAACCCATGCCTATTATACTCTGTGGTGATTGGAATGGAAGCAAGCGTGGACATGTTTACAAGTTCCTTAGGTCACAGGGGTTTGTATCATCATATGATATTGCTAATCAATACAGTGACAGTTACGCAGATGCTCACAAGTGGGTTAGTCACCGAAATCATAGAGGAAATATCTGTGGTGTTGACTTCATTTGGCTTTGCAATCCCAACCAAGCACGTAAACCTTTGAAGACAAGTTGGGCCGAAGCTGTATTTAGTATACTAAAATTCCAGTTACGAAAAGCATCATTGTCTGAAGAAGATGCATTTGCCTTTCTGAAGGGTGACAACTATGCTGATTCTGTCACATATTTTAATTTCTCCGAAGCACTCCGTCAGGTGAAGTTAATTGGTGTGCCTTATGGACTATGCTTTCAACAATTGCAAGATCTGTGGAATCTAGCAGATGTTGATGGAAATGGTGTCATCGACTTTGAAGAATTCAAGCAGAAAATATGGAATTCAACATGTCCAGAGCATGTGTTGGAAAATTTGAATGGATTGGAGGATGGTAAGACAGAACAGGAGGAGCAAGAAGCCATTGGTTTTAAGGTGAAGAATGCAATGCTGTATCCGCGTGAAGTGGAGAAAGGACTATGGCCAGAAGATTACTCTCTTTCTGATCATGCTAGACTCACAGCTGTGTTTTCACTAGCAAGGATGCGATGTTCTGCTTCACAAAACTGA 1440 0.4229 MVKTCGLRNKVVAAGGKFNLRRGNGSSHNVVNGYSSDGDLCRINKSERFSSVAEVDRDPFCVSFTTFNILAPIFKRIDPQNQDRRESDCRPFWLTRNERILNSLLSESSSIMCLQEFWVGNEELVNMYEERLGDAGYHLFKLARTNNRGDGLLTAIRKECLTVVDYGELLFNDCGDRVAQLLHVQSVAPYQKGSVPQEFLIVNTHLLFPHDSSLCIVRLNQVYQILQHVELYQRDNRLKPMPIILCGDWNGSKRGHVYKFLRSQGFVSSYDIANQYSDSYADAHKWVSHRNHRGNICGVDFIWLCNPNQARKPLKTSWAEAVFSILKFQLRKASLSEEDAFAFLKGDNYADSVTYFNFSEALRQVKLIGVPYGLCFQQLQDLWNLADVDGNGVIDFEEFKQKIWNSTCPEHVLENLNGLEDGKTEQEEQEAIGFKVKNAMLYPREVEKGLWPEDYSLSDHARLTAVFSLARMRCSASQN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0465 479 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 37 475 - -
Aed2g0465 479 Gene3D Endonuclease/exonuclease/phosphatase 44 476 IPR036691 -
Aed2g0465 479 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 37 475 - -
Aed2g0465 479 Pfam Endonuclease/Exonuclease/phosphatase family 98 273 IPR005135 GO:0003824
Aed2g0465 479 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Aed2g0465 479 SMART efh_1 378 406 IPR002048 GO:0005509
Aed2g0465 479 Pfam EF hand 379 401 IPR002048 GO:0005509
Aed2g0465 479 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Aed2g0465 479 SUPERFAMILY DNase I-like 57 274 IPR036691 -
Aed2g0465 479 SUPERFAMILY EF-hand 357 404 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0465 Aed-Chr2 3218598 3222979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0465 127 475 EF-hand Containing Proteins AT1G02270 63.231 5.13e-165 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0465 - - gmx:100777138 858.981
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0465 2 3218598 3222979 Aed2g0465 2 3218598 3222979 ECH