Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0455 ATGAGAGCCAAATTGGTCGTGTTCCCAATACGAGGCAGGAACTGGTGCTTCTCCAGAACCATCGATCACTCTCTCCCTGCTACCCATGCATCCTCTCAATTCCCTTCAACCTTCAAAGACTTATGGACCAATATCAACGTTCGTGATAAACCTCTTAACGCCAAAGCTGAGCTCTTTGTGGACTACATCGGCAACAAGATGAATCAAGCTTGGACAGGCTTGGAGAAAGCCCCTGATGGGTCCTTCAAGAATAAGATTCATGGGTTGGGGTTATGGCTGTTGTCTCAAGTTAAGCCCTCGGAGATATTTTTGAAGTCTATTTCCAAGGAAATCACTAGTGTTGAAGTCGTTTACCCATCAAGTTTGAATGCTAATCTTGTTCGTCGAAGACTAAGACATATTGCTGTGAGGGGAGCAATTATTCACCGGAAATACTTCTATGGTTCAGTTTCATTAATTCCATTGAGTTCAGCATTTAGCATTTTACCTTTGCCTAATGTCCCGTTCTTCTGGGTTTTATTTCGCACTTATTCTCATTGGAGAGCCATGCAGGGAAGTGAGAAGCTGTTTCGACTAGTCTCAAGTAGCAGCAAGACTTCAAATACTCATGCAGATAAAAAGAAAACTGAGTGTAAGGACTCTAAAAGTCAAAGCCATAGTTCAAATGAACCACGTTGGCGTCAATCACAGTACCATGAACAGTACTGTGAACGAGGTGTTGCGGCCATCCAAAGAACTAGAAAATCTTGTGCGTTTAGAAGATGGGAGCTTAGGGTTTGCTCAGGAAACAGAATGGATAATGATTTCGATAGGTTTTTGGATGGAAAGAGTTTGAGGTTGCTGGTTTTGGGATTTTGTTTGATTGGTGTTTGTGGGTTTGGGACCTTACTCCACAAGCATAAAAAGGCCGAGAAGGAAATCAAAGATATGGCCAAGAAAGTAAATGACTTATGTGGTATCAAAGAGTCTGATACTGGTTTAGCTGCACCAAGCCAGTGGGATCTTGTTTCTGATAAGCAAATGATGCAGGAGGAGCAACCTCTTCAGGTAGCACGGTGCACAAAGATCATAAATCCCAACTCTGAAGATGCTAAGTATGTTATCAATGTGAAGCAGATTGCAAAGTTTGTTGTTGGGCTAGGAGACAAGGTTTCACCCACTGACATAGAGGAGGGGATGCGTGTTGGGGTTGATAGAAACAAATATCAGATTCAGATTCCTTTGCCTCCAAAAATTGATCCAAGTGTAACCATGATGACTGTTGAAGAGAAGCCAGACGTGACATATAATGATGTTGGCGGTTGTAAGGAGCAGATTGAGAAGATGCGTGAAGTTGTTGAACTTCCCATGCTTCATCCAGAGAAATTCGTCAAGCTTGGGATTGATCCTCCAAAGGGTGTTCTTTGTTATGGTCCCCCAGGAACTGGGAAAACACTTTTAGCCAGGGCTGTGGCTAATAGGACTGATGCTTGTTTTATAAGAGTTATTGGAAGTGAGCTAGTTCAGAAATATGTTGGTGAGGGGGCTAGGATGGTTCGTGAACTATTTCAGATGGCTCGTTCGAAGAAGGCATGCATCGTGTTTTTTGATGAAGTTGATGCAATTGGAGGTGCACGATTTGATGATGGTGTTGGTGGTGACAATGAGGTTCAACGCACCATGCTTGAAATTGTGAATCAGCTTGACGGATTTGATGCTCGGGGAAACATCAAAGTTTTGATGGCAACTAACAGGCCAGACACTCTAGATCCCGCACTACTACGGCCTGGGCGGTTGGACCGTAAAGTTGAATTTGGCCTTCCTGACTTAGAGAGTAGGACGCAGATATTCAAGATACACACAAGAACCATGAACTGCGAAAGGGATATCCGATTTGAACTTCTGGCTCGGCTTTGCCCAAATTCCACTGGAGCTGATATAAGGAGTGTATGCACAGAAGCTGGTATGTACGCTATCCGTGCCAGGAGGAAGACTGTAACAGAGAAAGACTTCCTTGATGCAGTAAATAAAGTCATCAAAGGATATCAGAAGTTCAGTGCAACTCCCAAGTATATGGTCTACAACTGA 2067 0.4344 MRAKLVVFPIRGRNWCFSRTIDHSLPATHASSQFPSTFKDLWTNINVRDKPLNAKAELFVDYIGNKMNQAWTGLEKAPDGSFKNKIHGLGLWLLSQVKPSEIFLKSISKEITSVEVVYPSSLNANLVRRRLRHIAVRGAIIHRKYFYGSVSLIPLSSAFSILPLPNVPFFWVLFRTYSHWRAMQGSEKLFRLVSSSSKTSNTHADKKKTECKDSKSQSHSSNEPRWRQSQYHEQYCERGVAAIQRTRKSCAFRRWELRVCSGNRMDNDFDRFLDGKSLRLLVLGFCLIGVCGFGTLLHKHKKAEKEIKDMAKKVNDLCGIKESDTGLAAPSQWDLVSDKQMMQEEQPLQVARCTKIINPNSEDAKYVINVKQIAKFVVGLGDKVSPTDIEEGMRVGVDRNKYQIQIPLPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGVLCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIKGYQKFSATPKYMVYN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0455 688 MobiDBLite consensus disorder prediction 199 226 - -
Aed2g0455 688 SMART AAA_5 463 602 IPR003593 -
Aed2g0455 688 Pfam ATPase family associated with various cellular activities (AAA) 467 599 IPR003959 GO:0005524|GO:0016887
Aed2g0455 688 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 298 686 - -
Aed2g0455 688 CDD AAA 433 600 - -
Aed2g0455 688 Gene3D - 601 682 - -
Aed2g0455 688 Pfam AAA+ lid domain 622 665 IPR041569 -
Aed2g0455 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 678 IPR027417 -
Aed2g0455 688 Gene3D - 420 599 IPR027417 -
Aed2g0455 688 TIGRFAM 26Sp45: 26S proteasome subunit P45 family 360 671 IPR005937 GO:0005737|GO:0030163|GO:0036402
Aed2g0455 688 PANTHER 26S PROTEASE REGULATORY SUBUNIT 7 HOMOLOG A 298 686 - -
Aed2g0455 688 Pfam Mitochondrial K+-H+ exchange-related 4 192 IPR018786 -
Aed2g0455 688 MobiDBLite consensus disorder prediction 201 220 - -
Aed2g0455 688 ProSitePatterns AAA-protein family signature. 570 588 IPR003960 GO:0005524|GO:0016887
Aed2g0455 688 Gene3D - 295 419 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0455 Aed-Chr2 3134637 3142675 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0455 427 680 Miscellaneous Gene Families AT3G47060 41.699 2.58e-55 201
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0455 K03061 - gmx:100779787 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0455 2 3134637 3142675 Aed2g0455 2 3134637 3142675 ECH