Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0404 ATGGAAGACGAAATGGCGATGGACACTTCTCCCAGCTACTACTTCGACCCTCATAACCTCTCTTCTCGACAGCAGTTCCGCAGATACGGGAAGAGGCACTCAACTTCGGGTGCTTCAATCCAACATGACAACTCAGCTTCCAAGTTAAGTGAAACTGGGTTGTTTTATGATGGCCAAAGCATACATAGTCCAACTAATGCAGCACTTGTTCTTGAAAATATTAAACAAGAGGTTGAGAGTCTTGATGCTGATTACTTGGAAGAGAAGACACCATATTCCACTAGAAGGAAGCTGTCTGCTGATATTCATGGAATCCCTGGGGTGGATGCTGGTTTTGACTCTGTACGCTACTCATTAAAGGCTTGCAAGACAGAGGGTGACTCATTGGGAGATGGTGCAGAAACAATCTTTACTTTATTTGCGTCTCTGCTTGATTCTTCTTTGCAAGGACTGATGCCTATTGCTGATCTGATACTAAGAGTCGAGAATGGATGCCGAAATGTTTCAGAGTCTATAAGGTATGGTTTGAATACAAGGCATCGAGTTGTTGAGGACAAATTGATGAGGCAGAAGGCTCAGCTCTTGCTTGATGAGGCAGCAACATGGTCTCTCTTGTGGTTCCTTTATGGGAAAGGAAATATATCTCTAACCATATATTTTCGGTTTTTTATGGATCAATTATTGACTGAAGAACTATCTAAAGATCAAATACTGGTGTCAGGAACTTCACATGTGGTGGCTTGTGAGTTTGTTGCAGAGGACCATACAGCTCAATTATGCCTTCGGATAGTCCAGTGGTTAGAAGGCTTAGCTTCCAAAGCACTTGACCTTGAAGCGAAGGTGGTGCGTGGATCTCATGTTGGTAGTTATCTCCCCAGCTGTGGAGTTTGGCATCATACTCAACGTTACCTAAAGAAAGGAACTCTTGACATGAATGTTGTTCTTCACTTGGACTTCGATGCTCCAACACGTGAAAATGCTAATCTTTTGCCTGATGACAAGAAACAAGATGAATCTCTTCTAGAAGATGTATGGACTCTTTTAAGGGCTGGGAGGCTAGAAGAGGCTTGTGGACTCTGCCGGTCTGCTGGACAGGTCACCATAACTTTGACCATGATAAGTTTCTGGACTTCCTTAATCTATGCTTCCCATATTAACATGTTATTTTGGCAGCCATGGAGAGCTTCTTCTCTTTGCCCATTTGGAGGCTTGAACCAGTTTCCTTCTGTTGAAGCTCTGGTGAAGAATGGTAAAAATAGAACTTTGCAAGCTGTTGAATTTGAAAGTGGCATTGGTCATCAGTGGCATCTTTGGAAATGGGCTTCATATTGTGCATCAGAGAAAATAGCAGAGCAAGGTGGGAAATGTGAAGCAGCTGTATATGCAGCCCAATGTAGCAACCTAAAACGGATGCTTCCACTCTGCAATGACTGGGAGTCAGCATGCTGGGCAATGGCAAAGTCTTGGCTAGATGCGCAGGTGGACTTGGAAATCACTCGTTCACTGCCAGGGGGAGTTGATCAACTTAGAACTTTTGGAGATGTAATTGATGGAAGCCCTGGAAATGCTGATGGTTCCTTTGAGCCTTCTAATGGACCAGAAAATTGGCCAATTCAAGTTTTGAATCAGCAACCTCGACAACTCTCATATCTTCTTCAAAAACTTCATTCAGGGGAAATGATTCATGAAGCTGTTACCCGACAATGCAAGGAGCAACAGCGACAAATTCAGATGACTTTAATGCTAGGGGACATACCACGTGTACTAGACCTTATATGGTCATGGATAGCACCTACTGAAGATAACCAGAATGTATTTAGGCCTTCCGGAGATCCTCAAATGATACGATTTGGTGCACATCTAGTCCTTGTGCTTAGATATTTACTTGCCGAGGAAATGAAGGACACCTTCAAGGACAAGATTCTGAGTGTTGGTGATAATATTTTGCACTTGTATGCCCTATTTCTCTTTTCAAAGGAGCATGAGGAGTTGGTGGGCATATACGCTTCTCAGCTTGCACGTCACCGTTGCATTGATCTCTTTGTGCACATGATGGAACTTAGGCTGCACAGCAGTGTACATGTCAAATACAAGATATTCCTTTCTGCTATGGAATATTTGCCATTTTCTTCTATGGATGATTCCAAGGGAAATTTTGAAGACATTATTGAGAGAATTTTGTTGAGATCCCGAGAGATCAAGGTTGGCAAATACAATAACCAGTCAGATGTTGCAGAACAACACAGACTGCAGAGTCTTCAAAAAGCTAAAGTCATCCAGTGGCTTTGCTTTACACCACCATCTACAATTACTAATGTCAAAGGTGTTAGTAAAAAGCTTCTTCTCCGAGCACTGGTTCATAGCAACATACTCTTTCGGGAGTTTGCTTTGATTTCTATGTGGAGAGTACCAGCAATGCCAATAGGTGCCCATTCTATACTTGGTTTTCTTGCTGAACCCCTAAAACAGCTTGCAGAAACTCTTGAGACCTCTGAGGATTATAATGTTTTTGAGGATCTGAGGGAGTTCCAAGACTGGCGTGAGTATTACTCCTGTGATGCAACCTACCGCAATTGGCTAAAAATTGAAGTAGAGAATGCAGAAGTTCCTGTCTCTGAACTGTCACTAGAGGAAAAGGAAAGGGCCATTTCAGCTGCCAAGGAAACACTGAATGCATCGCTTTCACTGCTACAAAGAAAAGAAACACCTTGGTTGGCTTCGACTGATCGTATGTATGAATCAGCTGAACCTGTTTTCCTTGAACTTCATGCAACAGCAATGCTCTGCCTGCCATCTGGAGAGTGTTTGTGTCCAGATGCCACTGTTTGTACTACACTGACGAGTGCCCTCTACTCTTCAGCTGGGGATGAGGTTGTCTTAAATCGACAACTAATGGTGAATGTTTCCATATCTTCAAGGGACAGTTATTGCATTGATGTTGTTCTACGTTGCTTAGCAATAGCTGGTGATGGACTTGAACCACATGATCTCAATGATGGTGGTATTCTTGGCACCATCATGGCTGCTGGTTTTAAAGGTGAGCTTCCCCGGTTTCAAGCTGGAGTTACAATGGAAATATCCTGTTTGGATGCTTGGTATTCCAACAAGGATGGCACCTTAGAGTGCCCAGCAACATACATTGTGAAAGGACTTTGTCGTAGGTGCTGTCTCCCAGAAGTCATTCTTCGTTGCATGCAAGAGTTTTTGTTGTTTGAGAGGGAATACTCAATCTGCAAAATGGAGATTACAGAAGAGGAATGA 3261 0.4302 MEDEMAMDTSPSYYFDPHNLSSRQQFRRYGKRHSTSGASIQHDNSASKLSETGLFYDGQSIHSPTNAALVLENIKQEVESLDADYLEEKTPYSTRRKLSADIHGIPGVDAGFDSVRYSLKACKTEGDSLGDGAETIFTLFASLLDSSLQGLMPIADLILRVENGCRNVSESIRYGLNTRHRVVEDKLMRQKAQLLLDEAATWSLLWFLYGKGNISLTIYFRFFMDQLLTEELSKDQILVSGTSHVVACEFVAEDHTAQLCLRIVQWLEGLASKALDLEAKVVRGSHVGSYLPSCGVWHHTQRYLKKGTLDMNVVLHLDFDAPTRENANLLPDDKKQDESLLEDVWTLLRAGRLEEACGLCRSAGQVTITLTMISFWTSLIYASHINMLFWQPWRASSLCPFGGLNQFPSVEALVKNGKNRTLQAVEFESGIGHQWHLWKWASYCASEKIAEQGGKCEAAVYAAQCSNLKRMLPLCNDWESACWAMAKSWLDAQVDLEITRSLPGGVDQLRTFGDVIDGSPGNADGSFEPSNGPENWPIQVLNQQPRQLSYLLQKLHSGEMIHEAVTRQCKEQQRQIQMTLMLGDIPRVLDLIWSWIAPTEDNQNVFRPSGDPQMIRFGAHLVLVLRYLLAEEMKDTFKDKILSVGDNILHLYALFLFSKEHEELVGIYASQLARHRCIDLFVHMMELRLHSSVHVKYKIFLSAMEYLPFSSMDDSKGNFEDIIERILLRSREIKVGKYNNQSDVAEQHRLQSLQKAKVIQWLCFTPPSTITNVKGVSKKLLLRALVHSNILFREFALISMWRVPAMPIGAHSILGFLAEPLKQLAETLETSEDYNVFEDLREFQDWREYYSCDATYRNWLKIEVENAEVPVSELSLEEKERAISAAKETLNASLSLLQRKETPWLASTDRMYESAEPVFLELHATAMLCLPSGECLCPDATVCTTLTSALYSSAGDEVVLNRQLMVNVSISSRDSYCIDVVLRCLAIAGDGLEPHDLNDGGILGTIMAAGFKGELPRFQAGVTMEISCLDAWYSNKDGTLECPATYIVKGLCRRCCLPEVILRCMQEFLLFEREYSICKMEITEEE 1086
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0404 1086 PANTHER NUP107-RELATED 4 378 IPR007252 GO:0005643|GO:0017056
Aed2g0404 1086 PANTHER NUP107-RELATED 391 1067 IPR007252 GO:0005643|GO:0017056
Aed2g0404 1086 Pfam Nuclear pore protein 84 / 107 195 911 IPR007252 GO:0005643|GO:0017056
Aed2g0404 1086 PANTHER NUCLEAR PORE COMPLEX PROTEIN 4 378 - -
Aed2g0404 1086 PANTHER NUCLEAR PORE COMPLEX PROTEIN 391 1067 - -
Aed2g0404 1086 Gene3D - 297 382 - -
Aed2g0404 1086 Gene3D - 383 472 - -
Aed2g0404 1086 Gene3D - 744 938 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0404 K14301 - gmx:100786552 1981.45