Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0403 ATGAGCAGCGTTCTACAAGGGAAACGCAAGCGGCAGGAGTTGGCTTCGACGCTGTCGGCGTCGATGAGCAACGAGGAGCGCAGCCTGTTCAACATCATTCAAGGGAGGAAGGAGATGGGGATATGGCAGGGGGACCTCAAGCGCGAAACCAACATCCCCGATAGTTTCATCAAGAAATCCATCAAGATGCTCATCACAAAGAAACTCGTCAAGGAGGTCATCAACGTCCAGAACAAATCCAAGAAGCTCTTGATGGCCTCGGAATTCGAACCCTCCAAGGAGATCAGTGGCGGAGAGTGGTACACTGAGGGCAAACTCGACACTGGATTCATCGAGGCTCTTTCTGCTGTTTGCTTGAACCGGATTCGCAGCCAGAAGGTCGCTACCTGCGAGGGCATCCTTGATTGGATTAGGAAGGTTGGGAGGGAAACCTTCCCTGGGGGAGTCAGTGCAGGGCAGCTGGACCAGATTTTGAAGGTTTTGATTATGGAGAATAAGGTCAAGGAGTTCACTAGTAATGGCTTTGGGGATTTTGAATCTGTTCCCGTTGGTGAACTTTGTTATAGATTGGTTGCCGCTACTGTTCACGTTGCTGCCATGGCTTCTATTCCTTGTGGGAATCTACTTGAAAAACAGACAGAACAGAGTCAGAACAATGTAATTAGCGGATACTCGCTTAAAAGTGTTAAGTGTTTCTGTCTTACTGTGAGAATCAATCTCAGAAAAACAGAGAAGGAACGGTACTAG 747 0.4846 MSSVLQGKRKRQELASTLSASMSNEERSLFNIIQGRKEMGIWQGDLKRETNIPDSFIKKSIKMLITKKLVKEVINVQNKSKKLLMASEFEPSKEISGGEWYTEGKLDTGFIEALSAVCLNRIRSQKVATCEGILDWIRKVGRETFPGGVSAGQLDQILKVLIMENKVKEFTSNGFGDFESVPVGELCYRLVAATVHVAAMASIPCGNLLEKQTEQSQNNVISGYSLKSVKCFCLTVRINLRKTEKERY 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0403 248 SUPERFAMILY "Winged helix" DNA-binding domain 18 88 IPR036390 -
Aed2g0403 248 PANTHER RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED 5 222 IPR016049 -
Aed2g0403 248 Coils Coil 240 248 - -
Aed2g0403 248 Pfam RNA polymerase Rpc34 subunit 19 129 IPR007832 GO:0005666|GO:0006383
Aed2g0403 248 Gene3D - 2 81 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0403 Aed-Chr2 2771332 2772477 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0403 K03025 - gmx:100810279 311.612