Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0387 ATGGCCCTTACTAAACAAATCATGGGTTCTTCATTGCTAGAGAAGTCTATGTTTGTTCCCTCTTCATCACTTCTCAACCAAACTCGGTTCTTAGTTCCTTTGGAGAACAAGAGAGTTGTGAGGATGAAGAAAGCTTCAAAGTTTCCTGTAGCAGCTATAAGTGAGGATTTGATGAAGGGTTCTTCTTCTTCTTCTCCTTCATCATCATCATCAACCTCTTCTTCTTCTTCTCTTGTGTCTACAGAAAAACCAGTGAAATTCAAGGTTAGAGCTGTGATCACAGTGAGGAACAAGATCAAAGAGGATTTCAAAGAGACCATTGTGAAGCATATTGATGCACTCACTGACAGGATTGGAAGGAATGTTGTCCTTGAACTTGTTAGCACTGAGATTGATCCAAAGATCAAATCTGCAAAGAAGAGTAATGAAGCAGTGCTGAAGGATTGGTCAAAGAAGTCTAATCTGAAGGCAGAGAGAGTTAATTACACAGCTGAATTCATAGTTGACTCTAGTTTTGGGGAGCCAGGAGCTATTACTGTGACAAACAAACACCAGAAAGAGTTCTTCTTGGAAAGCATAACCATTGAAGGATTTGCCACTGGACCAGTTCATTTCCCCTGCAATTCATGGGTACAAGCAAGTAAAGATCTTCCTGGAAAGAGGATTTTCTTTTCCAATAAGCCTTATTTACCCGGGGATACACCTGCTGGGCTTAGATTATTAAGGGAGAAAGAGCTGAGAAATCTCAGAGGTGATGGCAAAGGAGTTAGAAAATTATCTGACAGAATATATGACTATGATATATACAATGATCTGGGAAATCCAGATAAAGGAATTGAACTTGCTAGGCAAAATCTTGGAGGATCAGATATGTATCCTTACCCAAGACGGTGTCGTACTGGCCGTGAACCAAGTGATACAGATATGTATGCAGAGAGTCGTGTGGAGAAGCCACTGCCTATGTATGTGCCAAGAGATGAACGTTTTGAGGAGTCAAAGCAGAACACATTCTCTGTGAAGAGGCTAAAGGCAGTGTTGCATAACTTGATTCCAGGTCTTAAGGCTAGCCTTTCTGCTAGCAACCAAGACTTCAATGAATTCTCAGATGTTGATGGCCTTTACAGTGAAGGGTTACTCATAAAGTTGGGTTTGCAAGATGACATGTTGAAGAAAATTCCATTTGTCAGCAAGATCCAAGAGTCCAGCCAGGGACTTCTTAAGTATGACACCCCTAAGATTATTTCAAAGGACAAATTTGCGTGGTTGCGAGATGACGAATTTGCCCGTCAAACACTAGCAGGAATTAACCCTGTTAACATTGAGAGGCTTCAAGTTTTCCCACCAGTTAGCAAACTAGACCCCGAAATTTATGGCCCCCAAGACTCTGCACTTAAAGAAGAACATATTTTGAATCAACTCAATGGCATGACTATTCAAGAGGCAATAAACGAAAATAAGCTCTTTATGATTGATTATCATGATATATATCTGCCTTTCCTAGAAGGGATCAATGCCCTTGATGGTAGGAAATCATATGCCACACGCACCATATTTTTCTTGACACCACGTGGCACTCTCAAGCCATTGGCTATAGAACTTAGCCTCCCTCATGCTGGACCTAATTCCCGATCAAAGCGCGTGGTTACGCCTCCTGCTGATGCAACTGCAAATTGGATATGGCAGCTTGCCAAGGCCCATGTTTGCTCCAATGATGCCGGGGTGCACCAACTTGTTAATCATTGGTTAAGGACACATGCGAACTTGGAACCATTTATATTGGCAGCTCATAGGCAATTAAGTGCAATGCATCCAATATACAAGTTATTGGATCCTCACATGAGATACACTTTGGAGATAAATGCCTTGGCACGACAGAGCTTGATCCATGCTGATGGAATCATTGAAAATTGTTTCACTCCTGGTCGCTATGCAATGGAGATTAGTTCTGCTGCTTACAAGAACTCTTGGCGCTTTGACATGGATAGTCTCCCTGCAGATCTCATCCGCAGGGGAATGGCAGTAGCTGACCCAACACAACCACATGGTCTAAAGCTCATAATGGAAGACTATCCTTATGCAGCTGATGGAATGCTAATATGGTCTGCAATGGAAGACTGGGTTCGAACCTATGTGAACCATTACTACCCTCACTCAAGCCTCATATGCAATGACAAAGAGCTACAATCTTGGTACTCTGAGTCAATCAATGTAGGCCATGCTGATCTCAGGCATGAAAATTGGTGGCCAACATTGAACAACAGTGAGGATCTTGTCTCAATTCTCTCCATATTGATTTGGAATGCATCTGCACAACATGCTGCACTCAACTTTGGTCAGTACCCTTATGGTGGCTATGTGCCTAATCGTCCACCACTGATGAGAAGGCTAATACCAGAGGAGGGTGATCCAGAATATGCAAGTTTTCATGCTGACCCTCAAAAGTATTTTCTGAATGCATTGCCTAGCTTGTTGCAAGCCACAAAGTTCATGGCTGTGGTTGACACACTGTCCACTCACTCACCTGACGAGGAATATTTGGGGGAGAGGCAACAACCTTCCATTTGGTCTGGTGATTCTGAGATGATTGAGGCCTTCTATGATTTCTCAGCTAAGGTTAGACAAATAGAGAAGGTCATTGATAGCAGGAACCTTGATCCCACTCTAAGGAACCGTTGTGGTGCAGGGGTGTTGCCTTATGAATTGCTTGCTCCTAGCTCTGAACCTGGTGTTACATGCAGAGGGGTACCCAACAGTGTCTCCACATAA 2766 0.4291 MALTKQIMGSSLLEKSMFVPSSSLLNQTRFLVPLENKRVVRMKKASKFPVAAISEDLMKGSSSSSPSSSSSTSSSSSLVSTEKPVKFKVRAVITVRNKIKEDFKETIVKHIDALTDRIGRNVVLELVSTEIDPKIKSAKKSNEAVLKDWSKKSNLKAERVNYTAEFIVDSSFGEPGAITVTNKHQKEFFLESITIEGFATGPVHFPCNSWVQASKDLPGKRIFFSNKPYLPGDTPAGLRLLREKELRNLRGDGKGVRKLSDRIYDYDIYNDLGNPDKGIELARQNLGGSDMYPYPRRCRTGREPSDTDMYAESRVEKPLPMYVPRDERFEESKQNTFSVKRLKAVLHNLIPGLKASLSASNQDFNEFSDVDGLYSEGLLIKLGLQDDMLKKIPFVSKIQESSQGLLKYDTPKIISKDKFAWLRDDEFARQTLAGINPVNIERLQVFPPVSKLDPEIYGPQDSALKEEHILNQLNGMTIQEAINENKLFMIDYHDIYLPFLEGINALDGRKSYATRTIFFLTPRGTLKPLAIELSLPHAGPNSRSKRVVTPPADATANWIWQLAKAHVCSNDAGVHQLVNHWLRTHANLEPFILAAHRQLSAMHPIYKLLDPHMRYTLEINALARQSLIHADGIIENCFTPGRYAMEISSAAYKNSWRFDMDSLPADLIRRGMAVADPTQPHGLKLIMEDYPYAADGMLIWSAMEDWVRTYVNHYYPHSSLICNDKELQSWYSESINVGHADLRHENWWPTLNNSEDLVSILSILIWNASAQHAALNFGQYPYGGYVPNRPPLMRRLIPEEGDPEYASFHADPQKYFLNALPSLLQATKFMAVVDTLSTHSPDEEYLGERQQPSIWSGDSEMIEAFYDFSAKVRQIEKVIDSRNLDPTLRNRCGAGVLPYELLAPSSEPGVTCRGVPNSVST 921
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0387 921 Gene3D - 333 418 IPR027433 -
Aed2g0387 921 SMART LH2_4 87 226 IPR001024 GO:0005515
Aed2g0387 921 ProSiteProfiles PLAT domain profile. 103 225 IPR001024 GO:0005515
Aed2g0387 921 PRINTS Lipoxygenase signature 557 574 IPR013819 GO:0016702|GO:0046872
Aed2g0387 921 PRINTS Lipoxygenase signature 595 615 IPR013819 GO:0016702|GO:0046872
Aed2g0387 921 PRINTS Lipoxygenase signature 575 592 IPR013819 GO:0016702|GO:0046872
Aed2g0387 921 ProSitePatterns Lipoxygenases iron-binding region signature 2. 602 612 IPR020834 GO:0016702|GO:0046872
Aed2g0387 921 SUPERFAMILY Lipoxigenase 231 920 IPR036226 -
Aed2g0387 921 Pfam Lipoxygenase 238 904 IPR013819 GO:0016702|GO:0046872
Aed2g0387 921 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 228 921 IPR013819 GO:0016702|GO:0046872
Aed2g0387 921 Gene3D PLAT/LH2 domain 73 229 - -
Aed2g0387 921 Gene3D - 230 332 - -
Aed2g0387 921 PANTHER LIPOXYGENASE 3, CHLOROPLASTIC 24 920 - -
Aed2g0387 921 Pfam PLAT/LH2 domain 138 224 IPR001024 GO:0005515
Aed2g0387 921 Gene3D - 419 552 - -
Aed2g0387 921 CDD PLAT_LH2 87 226 IPR042057 -
Aed2g0387 921 PANTHER LIPOXYGENASE 24 920 IPR000907 GO:0016702|GO:0046872
Aed2g0387 921 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 87 229 IPR036392 GO:0005515
Aed2g0387 921 Gene3D - 554 920 - -
Aed2g0387 921 MobiDBLite consensus disorder prediction 58 77 - -
Aed2g0387 921 PRINTS Plant lipoxygenase signature 833 847 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 221 242 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 406 422 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 293 312 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 361 382 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 260 276 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 512 536 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 195 213 IPR001246 GO:0016491
Aed2g0387 921 PRINTS Plant lipoxygenase signature 445 464 IPR001246 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0387 Aed-Chr2 2649855 2656551 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0387 1 920 Acyl Lipid Metabolism Gene Families AT1G17420 71.152 0.0 1380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0387 K00454 - gmx:100793614 1752.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0387 2 2649855 2656551 Aed2g0387 2 2649855 2656551 ECH