Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0383 ATGGCGGTTTCTACGATAGCATTATACGCTAGTCCACCGAGCAGCGTGTGTTCCACGACGCACCAGATCAACGCCCACGCTTCCTACGACTTCGAATTGGGGTCGCGATCTTCGTCGCCGGCGGGCTCCACGGCGCCTCCTTCGACGTCGCAGAAGGCGGTGATGGGCGGGCTCTCGTGCCTGTTCTCGTCGCCGGCGCCGGCGGTGAAGCACGCGCCGCTCTCGTCGAACTTTTCTGGCGAGGAAGACGAGATGAAGGAACTTAGCAGTTCCTTCTCGTATTCTCCGAGCAAATTTGCTGGTTCTTCGTGGAAGAGGGATCAGAGTCCTGTGTCGGTGTTTCATGGTCCTGTTTCGTGTAGCAGTAGCAGTAGAAGTTGCCCAGGTTCGACCCCTATTAGAAGTTTCAGAGGTGGGACTAGTGGTTTGTTTGATGGGTTTGTGAGGAATGCGTTGGGGTCTTCATGTTTGGACTATGACTTAGATGCGGGTGATTCTTCTGCTATGGTTGAAGAGTTGACCTTCAATTTGGAGGATAATTTCGTGGAGGGTGGCTTTCATTTTGAACCCTATGCCAAAAAATTGCTGCTTGGGGCGCAGTTAAGGCACAAGATCTTCTGTGAAGAGTTTGTCATTAAGGCCTTTTATGAAGCTGAGAAAGCACATAGAGGGCAGATGCGGGCAAGTGGGGATCCTTACTTGCAGCATTGTTTGGAGACTGCTGTGTTGCTGGCTTTGATTGGTGCAAATTCCACTGTTGTGGCGGCGGGGCTCTTGCATGACTCGCTGGATGATGCTTTTCTGAGTTATGATTATATATTTGGGACGTTTGGCGCTGGAGTTGCTGATTTGGTTGAAGGGGTTTCTAAACTGAGCCACTTAAGCAAGCTGGCTCGAGAAAATAATACAGCTTGCAAGTCAGTTGAAGCAGATCGCTTGCATACTATGTTCCTTGCCATGGCAGATGCTAGAGCTGTCCTCATTAAATTGGCAGATCGGTTGCATAATATGATGACACTAGATGCATTGCCAGTGGTAAAGCGACAGAGGTTTGCAAAGGAGACTTTGGAGATTTTTGCACCTTTGGCCAATCGCTTAGGAATTTCTACTTGGAAGGAACAATTAGAAAATTTGTGTTTTAAGCATCTCAACCCAAGCCAGCATGAGGAGCTTTTGTCCAAGCTTGTGGAATCATACGATGATGCAATGATTACTTCTGCAATAGAGAGATTAGAGCAAGCACTTAAAGATGAAGGCATATCTTATAATGTCATTTCTGGGCGGCACAAGAGCTTGTACAGCATTTATTGCAAAATGTTAAAGAAGAAACTAACCATAGATGATATCCATGACATTCATGGGCTGCGCTTGATTGTTGACAAGGAAGAAGACTGTTACAAGGCTTTGACAGTTGTTCATCGATTATGGTCTGAGGTGTCTGGAAAGCTGAAAGATTACATATGTCGTCCCAAGTTCAATGGATATCAATCTCTGCATACTGTGGTGATGGGTGAAGGCAAGGTTCCCCTTGAAGTACAAATTCGAACAAAAGATATGCATTTACAAGCAGAATTTGGATTTGCTGCTCATTGGAGATACAAGGAAGATGATTGTCAGCATTCTTCATTTGTGCTTCAGATGGTTGAGTGGGCTCGATGGGTTGTCACCTGGCAGTGCGAAGCAATGAGTAGAGATTGTTCCTCTGTTGGATATGCTGATTCAGTCAAGCCACCATGCACTTTCCCTTCCCATGCTGATGATTGCCCATATTCTTACAAGCCTGATTGTGGTCAGAATGGGCCTGTGTTCATTATCATGATTGAGAATGATAAGATGTCTGTCCAAGAATTTAGTGCAAACTCAACAGTATTGGATTTGTTGAAAAGATCTGGGAGAGCAAGCTCTAGGTTGACAACATACAGGTTCCCATTGAAGGAAGAGTTGAGGCCAAGGCTGAATCATAAACCTGTCAGTGATCCCAATAGCAAGTTGAAGATGGGCGACGTGATTGAACTTACACCAGCCATACCTGACAAGTCTCTTACAGAATACAGGGAAGAAATCCAGCGCATGTATGATCGCGGCCTAACTGTGTCAAGCATGGGAACTGCTGCAAGCACCATGGCTGGCTCAAGAAGTTGA 2142 0.4631 MAVSTIALYASPPSSVCSTTHQINAHASYDFELGSRSSSPAGSTAPPSTSQKAVMGGLSCLFSSPAPAVKHAPLSSNFSGEEDEMKELSSSFSYSPSKFAGSSWKRDQSPVSVFHGPVSCSSSSRSCPGSTPIRSFRGGTSGLFDGFVRNALGSSCLDYDLDAGDSSAMVEELTFNLEDNFVEGGFHFEPYAKKLLLGAQLRHKIFCEEFVIKAFYEAEKAHRGQMRASGDPYLQHCLETAVLLALIGANSTVVAAGLLHDSLDDAFLSYDYIFGTFGAGVADLVEGVSKLSHLSKLARENNTACKSVEADRLHTMFLAMADARAVLIKLADRLHNMMTLDALPVVKRQRFAKETLEIFAPLANRLGISTWKEQLENLCFKHLNPSQHEELLSKLVESYDDAMITSAIERLEQALKDEGISYNVISGRHKSLYSIYCKMLKKKLTIDDIHDIHGLRLIVDKEEDCYKALTVVHRLWSEVSGKLKDYICRPKFNGYQSLHTVVMGEGKVPLEVQIRTKDMHLQAEFGFAAHWRYKEDDCQHSSFVLQMVEWARWVVTWQCEAMSRDCSSVGYADSVKPPCTFPSHADDCPYSYKPDCGQNGPVFIIMIENDKMSVQEFSANSTVLDLLKRSGRASSRLTTYRFPLKEELRPRLNHKPVSDPNSKLKMGDVIELTPAIPDKSLTEYREEIQRMYDRGLTVSSMGTAASTMAGSRS 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0383 713 CDD HDc 231 359 IPR003607 -
Aed2g0383 713 CDD NT_Rel-Spo_like 407 525 IPR007685 GO:0015969
Aed2g0383 713 ProSiteProfiles S4 RNA-binding domain profile. 651 687 - -
Aed2g0383 713 PANTHER - 1 712 - -
Aed2g0383 713 Pfam HD domain 216 368 - -
Aed2g0383 713 SMART hd_13 229 346 IPR003607 -
Aed2g0383 713 Gene3D Beta Polymerase, domain 2 388 517 IPR043519 -
Aed2g0383 713 SUPERFAMILY Nucleotidyltransferase 374 563 IPR043519 -
Aed2g0383 713 Gene3D Hypothetical protein af1432 200 384 - -
Aed2g0383 713 PANTHER GUANOSINE-3',5'-BIS DIPHOSPHATE 3'-PYROPHOSPHOHYDROLASE 1 712 - -
Aed2g0383 713 SMART RelA_SpoT_2 427 537 IPR007685 GO:0015969
Aed2g0383 713 ProSiteProfiles HD domain profile. 233 337 IPR006674 -
Aed2g0383 713 SUPERFAMILY HD-domain/PDEase-like 194 384 - -
Aed2g0383 713 Pfam Region found in RelA / SpoT proteins 427 536 IPR007685 GO:0015969
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0383 Aed-Chr2 2603365 2608404 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0383 228 534 EF-hand Containing Proteins AT3G17470 30.395 3.21e-36 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0383 K00951 - gmx:100787301 1351.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0383 2 2603365 2608404 Aed2g0383 2 2603365 2608404 ECH