Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0376 ATGAAGATAATTCACAAAATTCTTTTCTTCTTTGCTCTTATAGCCAGCTATCACTGCAAGCCACCTAACACAGTAACAGCAGGAGACTTTGTGTTCCATTTAGACCCTGGAAACACTAATTCAAACGTGTTCAAGTCTGTAATAACCCCTGCATTTGTCAAAGATTTCCCTGCTGTCAATGGACTTGGCGCTTCCGTAGCACGCGTTGACATAGCTCAAGGTGGAGTGGTTCCAATGCACACACATCCTGGTGCCAACGAAATAGCCATCATGGTGGATGGTCAAGTCAATGCTGGCTTCATGACAACCGATGCACTTTATGAGCAGACACTGAAACCTGGAGATCTTTTTGTTATCCCACTGGGACAGATGCATTTTTTTGTGAATTCTGGTAAGGGAAATGCTACTTTTTACGCTGCTTATAGTAGCGCAGATCCTCGTGTGCAACCGGTTGATCTTCTGTTGTTTGGCAACAACTTGTCTTCTAACACGGTTGCACAAACTACCCTCATTGAGGTTTCCCAAGTGAGGAGATTGAAGGCCATTTTTGGTGGCAGTGGCTAG 564 0.445 MKIIHKILFFFALIASYHCKPPNTVTAGDFVFHLDPGNTNSNVFKSVITPAFVKDFPAVNGLGASVARVDIAQGGVVPMHTHPGANEIAIMVDGQVNAGFMTTDALYEQTLKPGDLFVIPLGQMHFFVNSGKGNATFYAAYSSADPRVQPVDLLLFGNNLSSNTVAQTTLIEVSQVRRLKAIFGGSG 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0376 187 CDD cupin_OxOx 14 183 - -
Aed2g0376 187 Gene3D Jelly Rolls 11 187 IPR014710 -
Aed2g0376 187 ProSitePatterns Germin family signature. 75 88 IPR019780 GO:0030145
Aed2g0376 187 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 15 183 - -
Aed2g0376 187 PRINTS Germin signature 109 129 IPR001929 GO:0030145
Aed2g0376 187 PRINTS Germin signature 142 157 IPR001929 GO:0030145
Aed2g0376 187 PRINTS Germin signature 80 100 IPR001929 GO:0030145
Aed2g0376 187 SUPERFAMILY RmlC-like cupins 12 180 IPR011051 -
Aed2g0376 187 SMART Cupin_1_3 32 177 IPR006045 -
Aed2g0376 187 Pfam Cupin 34 171 IPR006045 -
Aed2g0376 187 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 15 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0376 Aed-Chr2 2576547 2577180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0376 15 187 Miscellaneous Gene Families AT1G72610 45.455 2.41e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0376 - - gmx:100305768 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0376 2 2576547 2577180 Aed2g0376 2 2576547 2577180 ECH