Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0375 ATGAAGAATATGTTTCTCATTCTTTTGTTTTCTGCTCTTCTTTCTTCATCCACTTCCAATGCTTCTAATGTGAATGATTTCTGCGTTGCGAACCTTCAAGGTCCAGATAGCCCTTCAGGCTATCACTGCAGGCCACCCAGTACAGTAACAGCAAATGACTTTAAGTACAGTTTTAAATCTGCAGTCCCAATCCCTGTCGGAAGTGTGATATACCCTGCAACTGTTAACGAATTTCCTGCTCTCAATGGTCAGGGCATCTCTGTAGCACGTGTAGAGATCGAAAAAGGTGGATTTTTTCCTATGCACACACATGGTGCCACTGAATTACTGATCATGGTTAAAGGTGAAGTGATTGCTGGAACCGTGACACCTAACACATCTTATGTGAATACACTGAAACCCGGAGATCTTATGGTTTTCCCAGAGGGACTACAGCATTTTCAAATAAATAACGGTAACGAGAAAGCCGTTGCTTATGCTGCCTTTAGTAGCGCAAACCCTCGTCTCCACAACCTTTTTCAGGTATTATTCGCCAACAATGCATCTTCCGAATACATTGCACGAACTACCTTCCACGATCTATCCCAAGTGAAGAAGAATAAGGCTCGTTTTGGTGGCACCAACTAA 627 0.429 MKNMFLILLFSALLSSSTSNASNVNDFCVANLQGPDSPSGYHCRPPSTVTANDFKYSFKSAVPIPVGSVIYPATVNEFPALNGQGISVARVEIEKGGFFPMHTHGATELLIMVKGEVIAGTVTPNTSYVNTLKPGDLMVFPEGLQHFQINNGNEKAVAYAAFSSANPRLHNLFQVLFANNASSEYIARTTFHDLSQVKKNKARFGGTN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0375 208 Pfam Cupin 65 188 IPR006045 -
Aed2g0375 208 SMART Cupin_1_3 59 198 IPR006045 -
Aed2g0375 208 PRINTS Germin signature 130 150 IPR001929 GO:0030145
Aed2g0375 208 PRINTS Germin signature 163 178 IPR001929 GO:0030145
Aed2g0375 208 PRINTS Germin signature 101 121 IPR001929 GO:0030145
Aed2g0375 208 SUPERFAMILY RmlC-like cupins 57 205 IPR011051 -
Aed2g0375 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 12 204 - -
Aed2g0375 208 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 1 12 204 - -
Aed2g0375 208 CDD cupin_OxOx 20 204 - -
Aed2g0375 208 Gene3D Jelly Rolls 19 208 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0375 Aed-Chr2 2571447 2572073 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0375 1 208 Miscellaneous Gene Families AT5G20630 41.784 2.32e-51 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0375 - - gmx:100813853 218.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0375 2 2571447 2572073 Aed2g0375 2 2571447 2572073 ECH