Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0374 ATGGACCAGATCTCGTCTGGCGCCTTTATAAAAATTGAAACTCATAGGCGCCATGCGGTCTGGTGCCTCACAGTGCAAGATGCCACGTGTCAAGCATTCATTAGCAGCTTGTGGCAGTCTGGCACCTTCAAAGGACAGGATGCCACGTGTCGGGCATTCATTGCAGAAGCGTGCAGCGGTCTGACGCCTTCAAGGAGGATGCACCACGTGGCGCGTGCTGATTCGACGGTTTGGAAAGCAGGAGACGTCAAGGGTCCAGATAGCCCTAAAGGCTATCACTGCTTGCCACCTGATACAGTAACAGCAGATGACTTCAAATACAATTTGTTTCGTGCAAACGTCGCAATCCCAGAGAAGGTGTTAGCAAGACAAGCAACTGTAGACGAGTTTCCTGCTGTGAACGGTCTTGGCATATTTGTAGCACGTGTAGATATTGAAAGAGGTGGAGTTTTTCCAATGCACACTCCTCCGAGAGGAAGTGAAGCACTCATCATGGTTGAAGGTGAATCGTTTGTTGGAATCGTGGCACAGACCAAGGCTTATGTGAATACACTCAAACCGGGAGATGTTGTGGTTTTCCCACAAGGACTGTTGCATTTTCAAGTGAATACTGGTAAGGGGAAATCCGTTTCTTATAGCGCTTTTAGCAGCGCACGCCCTGTTCTCCAACTGCTTCATCAGAATTTATTTGCCAACAACGTGTCTTCTGCAATTATTGCACTAGCTACCTTCCTTGATGAGGCACAAATTTTGTGTAACTTACAAATGCTCAAATACATGAATACTTATAAGCTCATAACACTTTGGTACAATGAACACAATATTCAAATAACATATAATCCTTAG 846 0.4563 MDQISSGAFIKIETHRRHAVWCLTVQDATCQAFISSLWQSGTFKGQDATCRAFIAEACSGLTPSRRMHHVARADSTVWKAGDVKGPDSPKGYHCLPPDTVTADDFKYNLFRANVAIPEKVLARQATVDEFPAVNGLGIFVARVDIERGGVFPMHTPPRGSEALIMVEGESFVGIVAQTKAYVNTLKPGDVVVFPQGLLHFQVNTGKGKSVSYSAFSSARPVLQLLHQNLFANNVSSAIIALATFLDEAQILCNLQMLKYMNTYKLITLWYNEHNIQITYNP 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0374 281 CDD cupin_OxOx 80 250 - -
Aed2g0374 281 SMART Cupin_1_3 107 251 IPR006045 -
Aed2g0374 281 SUPERFAMILY RmlC-like cupins 86 234 IPR011051 -
Aed2g0374 281 PANTHER GERMIN-LIKE PROTEIN 81 250 - -
Aed2g0374 281 PRINTS Germin signature 154 174 IPR001929 GO:0030145
Aed2g0374 281 PRINTS Germin signature 183 203 IPR001929 GO:0030145
Aed2g0374 281 PRINTS Germin signature 216 231 IPR001929 GO:0030145
Aed2g0374 281 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 81 250 - -
Aed2g0374 281 Gene3D Jelly Rolls 74 257 IPR014710 -
Aed2g0374 281 Pfam Cupin 117 248 IPR006045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0374 Aed-Chr2 2565742 2570091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0374 82 250 Miscellaneous Gene Families AT5G20630 42.442 5.12e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0374 - - gmx:100818105 182.185