Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0373 ATGAAGATAATTCACATTCTTTCTCTGATTGCTCTTCTGTCATCTACTACTTCCTATGCTGCTGTGAATGATTTCTGTGTAGCGGACCTAAAAGGTCCAGATAGCCCTTCAGGCTATCACTGCAAGCCACCTAACACAGTCACTGTTGATGACTTTGTGTTCTCTGGCTTTGTGGCTGGAAATACCACAAACACTTTCAATGCTGCATTAACCTCTGCATTTGTCACTGATTTTCCAGGTGTGAATGGTCTTGGTGTATCTGCTGCACGGTTAGACATAGCCAAAGGTGGATCAATCCCAATGCACACACACCCTGCTGCCACTGAACTTCTGATTATAGTGAAAGGTCAAATCACTGCTGGTTTCATGACACCAACTGCACTTTATACCAAGACACTGAAACCGGGAGATATTATGGTTTTCCCTCAAGGACAGTTGCATTTTCAGGTGAATTCTGGAGATGGAATAGCCACTGCTTTTCTTGCTTTCAGCAGTGCAAACCCTGGAGCACAACTACTTGACCTTCTGTTATTTGGCAACACCTTGCCCTCTGAGTTGGTTGCAGAAACTACCTTCCTTGACGTTGCACAAGTGAAGAAGCTTAAGGCTCGTTTCGGTGGCAGAGGCTAG 630 0.4492 MKIIHILSLIALLSSTTSYAAVNDFCVADLKGPDSPSGYHCKPPNTVTVDDFVFSGFVAGNTTNTFNAALTSAFVTDFPGVNGLGVSAARLDIAKGGSIPMHTHPAATELLIIVKGQITAGFMTPTALYTKTLKPGDIMVFPQGQLHFQVNSGDGIATAFLAFSSANPGAQLLDLLLFGNTLPSELVAETTFLDVAQVKKLKARFGGRG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0373 209 CDD cupin_OxOx 20 205 - -
Aed2g0373 209 PANTHER GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3 7 205 - -
Aed2g0373 209 SMART Cupin_1_3 55 199 IPR006045 -
Aed2g0373 209 PANTHER GERMIN-LIKE PROTEIN 7 205 - -
Aed2g0373 209 SUPERFAMILY RmlC-like cupins 24 206 IPR011051 -
Aed2g0373 209 Pfam Cupin 58 199 IPR006045 -
Aed2g0373 209 Gene3D Jelly Rolls 19 208 IPR014710 -
Aed2g0373 209 ProSitePatterns Germin family signature. 97 110 IPR019780 GO:0030145
Aed2g0373 209 PRINTS Germin signature 131 151 IPR001929 GO:0030145
Aed2g0373 209 PRINTS Germin signature 102 122 IPR001929 GO:0030145
Aed2g0373 209 PRINTS Germin signature 164 179 IPR001929 GO:0030145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0373 Aed-Chr2 2555701 2556330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0373 3 207 Miscellaneous Gene Families AT5G20630 58.937 1.32e-79 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0373 - - gmx:100527498 374.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0373 2 2555701 2556330 Aed2g0373 2 2555701 2556330 ECH