Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0340 ATGCGTAAGAATGTGCTTGACATAAACAACATAACGAGTGTGAGAGGGCTTATTGGAACTGGCATCAACATCATTGGCTCAACAATTGATGGTCTTACTTCTTTCTTGGGTCGATCTGTGTGCCTCCAGTTGATTAGTGCTACCAAGCCTGATGGAAGTGGAAATGGGGTAGTCGGGAAGAAGACGTATTTGGAAGGTATTATTACGTCGATACCAACTCTGGGAGCTGGCCAATCTGCATTCAACATTCATTTTGAATGGGACGCAGACATGGGAATTCCTGGAGCATTTCTAATAAAAAATTACATGCAAGTCGAGTTCTTCCTAGTCACTTTGACTCTTGAAGACATTCCTAACCATGGAACAATGCACTTTGTTTGCAACTCATGGGTATACAATTCCAAAGTTTACGAAAAGGATCGAATTTTCTTTGCCACCGAGACATATGTTCCAAGTGAAACACCAGGTCCACTTGTGACGTATAGAGAAGCAGAATTGGAGGCTCTAAGAGGAAATGGAACAGGAAAGCGCAGGGAATGGGACAGAGTTTATGATTTTGATGTTTACAATGATTTGGGGAATCCTGACAGTAATATAAACCTTGCTCGTCCAGTTCTTGGAGGATCTATCACACACCCTTATCCTCGTAGGGGAAGAACCGGTAGAAAACCAACAAGGAAAGATCCCAACACTGAAAAACTTGGGGAGATTTATGTTCCAAGAGATGAAAATTTTGGTCACTTGAAGTCATCTGATTTTCTTACTTATGCGCTAAAATCTTTGACTCGAAGCTTCTTGCCTACACTCAAAACTGTGTTTGATATAAACTTCACACCGAATGAGTTTGATAGTTTCGAAGAAGTACGTGCACTCTGTGAAGGTGGAATTAAGCTACCTACAGATATATTGAGCAAAATTAGCCCCTTACCCGTGCTTAAGGAAATCTTCCGCACTGATGGTGAAAGTGTCCTTAAGTTTTCAGTACCTGATTTGATTAAAGCAGTTAATAAATCTGCATGGATGACTGATGAGGAATTTGCAAGAGAGATGATTGCTGGTGTAAACCCTTGCGTTATTCAACGTCTACAAGAGTTTCCACCGCAAAGTAAGCTAGATCCCACACTCTATGGTGATCAAACAAGTAAAATGACTAAGGAACACTTGGAGATTAACCTTGAAGGGCTCACAATAGATAAGGCAACGAGACTTCCATTGTGTTTACATATTGCATTTGTGGAGCAGGCAATTAAGGGTCATAGGTTATTCATATTAGATCACCATGACGTAGTTATGCCGTTTTTGAGAAGGATAAACGAATCTAAATCATCAAAAGCTTATGCCACCAGGACAGTCCTTTTCTTGAAAGATGATGGGACCTTAAAGCCATTGGCCATCGAATTAAGTTTGCCACATCCAGATCAACAACTTGGTGCCTATACTAGTAAAGTCATCTTGCCTGCAAAAGAAGGTGTAGAAAGTACAATTTGGTTATTGGCCAAGGCTCATGTTATTGTCAATGACTCGTGCTATCATCAACTCATAAGCCACTGGTTGAATACTCATGCTGTGATTGAGCCGTTTGTGATAGCAACAAACAGGAATCTGAGTGTTCTTCACCCAATTTATAAACTTCTATTTCCTCACTATCGTGACACAATGAATATCAATGCACTTGCTCGACAATCACTTATTAATGCTGATGGCTTCATAGAGCAAACCTTTTTGGGTGGAAAGTATGCTGTGGAGATGTCTTCTAAAGCTTACAAAAATTGGGTGTTCCCTCACCAAGCATTACCTGCTGATCTCATCAAGAGAGGAATGGCTATTGAGGATTCATCTTGTCCCAACGGCCTTCGACTTGTAATAGAGGATTATCCATATGCTGTTGATGGATTAGAGATATGGAATGCTATAAAGACATGGGTCAATGACTATGTCTCATTGTACTATGCCACAGATGATGCTATTAAAAAAGACCATGAACTCCAAGCATGGTGGAAAGAAGCTGTTGAGAAGGGTCACTGTGACTTAAAGGATAAGTCATGGTGGCCTAAAGTGGATACTCGTGAAGAGCTTATTCAATCATGTAGTACCATCATTTGGATTGCTTCAGCTCTTCATGCAGCTGTTAATTTCGGACAATATCCTTATGGTGGTTTTATCCTGAATCGTCCAACTCTTAGCAGAAGATTGATTCCAGAACAAGGAACCAAAGAATATGATGAGATGGTGAAGAATCCTCAAAAGGCTTATTTGAGAACAATCACACCAAAGTTTCAGGCTCTTGTTGACCTTTCAGTGATAGAGATATTGTCAAGACACGCTTCTGATGAGGTCTACCTTGGACAGAGGGACAATCCAAATTGGACCTCTAATCCAAAGGCAATAGAAGCCTTTAAAAATTTTGGAAAAAAGCTTGCAGAGATTGAGACAAAGATATCAGAAAGAAACCATGATCCAAATCTTAGAAATCGAACAGGGCCAGCTCAATTGCCCTACACTGTTCTTCTTCCTACTAGTGAAACAGGGTTGACTTTTAGAGGAATTCCCAATAGCATCTCTATCTAA 2568 0.4034 MRKNVLDINNITSVRGLIGTGINIIGSTIDGLTSFLGRSVCLQLISATKPDGSGNGVVGKKTYLEGIITSIPTLGAGQSAFNIHFEWDADMGIPGAFLIKNYMQVEFFLVTLTLEDIPNHGTMHFVCNSWVYNSKVYEKDRIFFATETYVPSETPGPLVTYREAELEALRGNGTGKRREWDRVYDFDVYNDLGNPDSNINLARPVLGGSITHPYPRRGRTGRKPTRKDPNTEKLGEIYVPRDENFGHLKSSDFLTYALKSLTRSFLPTLKTVFDINFTPNEFDSFEEVRALCEGGIKLPTDILSKISPLPVLKEIFRTDGESVLKFSVPDLIKAVNKSAWMTDEEFAREMIAGVNPCVIQRLQEFPPQSKLDPTLYGDQTSKMTKEHLEINLEGLTIDKATRLPLCLHIAFVEQAIKGHRLFILDHHDVVMPFLRRINESKSSKAYATRTVLFLKDDGTLKPLAIELSLPHPDQQLGAYTSKVILPAKEGVESTIWLLAKAHVIVNDSCYHQLISHWLNTHAVIEPFVIATNRNLSVLHPIYKLLFPHYRDTMNINALARQSLINADGFIEQTFLGGKYAVEMSSKAYKNWVFPHQALPADLIKRGMAIEDSSCPNGLRLVIEDYPYAVDGLEIWNAIKTWVNDYVSLYYATDDAIKKDHELQAWWKEAVEKGHCDLKDKSWWPKVDTREELIQSCSTIIWIASALHAAVNFGQYPYGGFILNRPTLSRRLIPEQGTKEYDEMVKNPQKAYLRTITPKFQALVDLSVIEILSRHASDEVYLGQRDNPNWTSNPKAIEAFKNFGKKLAEIETKISERNHDPNLRNRTGPAQLPYTVLLPTSETGLTFRGIPNSISI 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0340 855 Gene3D - 339 488 - -
Aed2g0340 855 PRINTS Plant lipoxygenase signature 446 470 IPR001246 GO:0016491
Aed2g0340 855 PRINTS Plant lipoxygenase signature 115 133 IPR001246 GO:0016491
Aed2g0340 855 PRINTS Plant lipoxygenase signature 180 196 IPR001246 GO:0016491
Aed2g0340 855 PRINTS Plant lipoxygenase signature 213 232 IPR001246 GO:0016491
Aed2g0340 855 PRINTS Plant lipoxygenase signature 141 162 IPR001246 GO:0016491
Aed2g0340 855 PRINTS Plant lipoxygenase signature 279 300 IPR001246 GO:0016491
Aed2g0340 855 PRINTS Plant lipoxygenase signature 768 782 IPR001246 GO:0016491
Aed2g0340 855 ProSitePatterns Lipoxygenases iron-binding region signature 1. 511 525 IPR020833 GO:0016702|GO:0046872
Aed2g0340 855 PRINTS Lipoxygenase signature 531 551 IPR013819 GO:0016702|GO:0046872
Aed2g0340 855 PRINTS Lipoxygenase signature 493 510 IPR013819 GO:0016702|GO:0046872
Aed2g0340 855 PRINTS Lipoxygenase signature 511 528 IPR013819 GO:0016702|GO:0046872
Aed2g0340 855 ProSitePatterns Lipoxygenases iron-binding region signature 2. 538 548 IPR020834 GO:0016702|GO:0046872
Aed2g0340 855 MobiDBLite consensus disorder prediction 212 232 - -
Aed2g0340 855 Gene3D - 249 338 IPR027433 -
Aed2g0340 855 SMART LH2_4 1 146 IPR001024 GO:0005515
Aed2g0340 855 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 1 149 IPR036392 GO:0005515
Aed2g0340 855 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 16 855 - -
Aed2g0340 855 Gene3D - 489 854 - -
Aed2g0340 855 SUPERFAMILY Lipoxigenase 151 855 IPR036226 -
Aed2g0340 855 Pfam PLAT/LH2 domain 48 144 IPR001024 GO:0005515
Aed2g0340 855 Gene3D - 150 248 - -
Aed2g0340 855 Gene3D PLAT/LH2 domain 1 149 - -
Aed2g0340 855 Pfam Lipoxygenase 158 838 IPR013819 GO:0016702|GO:0046872
Aed2g0340 855 ProSiteProfiles PLAT domain profile. 20 145 IPR001024 GO:0005515
Aed2g0340 855 CDD PLAT_LH2 13 145 IPR042057 -
Aed2g0340 855 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 148 855 IPR013819 GO:0016702|GO:0046872
Aed2g0340 855 PANTHER LIPOXYGENASE 16 855 IPR000907 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0340 Aed-Chr2 2253885 2258822 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0340 1 855 Acyl Lipid Metabolism Gene Families AT1G55020 57.028 0.0 993
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0340 K15718 - gmx:547694 1543.87