Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0338 ATGATAATAGGTGGGATCTTAGGAGGTAATAAGGGGCAGAAGATAAAGGGGACAGTGGTGTTGATGCCAAAGAATGTTTTGGACTTCAACGCCATAACCTCCATCGGTAAAGGCGGTGTTGTTGACACTGCCACCGGTCTCATCAGCTCCGGCGTCAGCCTCGTTGGTAATGCTGTTGACACCGTCACTTCCTTCGCTGGCCGTAGCATCTCCTTGCGCTTGATCAGTGCTACTCAGACTGATGGTAGTGGAAAAGGAAAAGTTGGAAAGGAAGCCTATTTGGAAAATCATCTTCCGAACTTACCAACTTTGGGAGCAAGGCAGGACGCATTCGATGTTTACTTTGAATATGATGCCAATTTCGGAATTCCGGGAGCATTTTACATCAAAAACTTCAAAACCGATGAGTTTTTCCTCGTCAGTGTCAAACTCGAGGACATTCCAAACCATGGAACCATTAACTTTGTTTGTAACTCTTGGGTTTACAACTCCAAGAGTTACAAAAAGGATCGCATTTTCTTTCTCAATGATACATATCTTCCTAGTGCTACACCAGCTCCACTAGTTAAGTACAGACAAGAAGAATTGGAGGTTTTGAGAGGAGATGGAACAGGAAAACGTAGGGACTTCGACAGGATCTATGATTATGATGTTTATAATGATTTGGGAAACCCAGATGGTGGTGATCCTCGCCCAATCCTTGGAGGTTCTAGCAACTATCCTTACCCTCGCAGAGTTAGAACCGGTAGAGAAAAGACCAGGAAAGATCCCAATAGTGAGAAACCGGGTGAGATTTATGTTCCAAGAGATGAGAACTTTGGTCACTTGAAGTCGTCAGATTTCCTTACATATGGAATAAAATCCTTGTCTCAGAACGTGATACCTTTGTTCAAATCTGTGATATTTGACTTGAGAGTCACATCGAGTGAGTTTGATAGCTTCGATGAAGTGCGTGGTCTCTTTGAGGGTGGGATTAAGCTCCCAACAAATATACTTAGCCAAATTAGTCCCTTACCTGTTCTCAAGGAAATCTTCCGCACTGATGGTGAAAATACCCTTCAATTTCCACCACCCCATGTAATCAGAGTTAGCAAGTCTGGATGGATGACTGATGAAGAATTTGCAAGGGAGACAATTGCTGGTGTAAACCCAAATGTTATTCGACGTCTTGAAGAATTCCCACCAAAAAGCACGCTTGATCCCACACTCTATGGTGATCAAACTAGTACCATAACAAAAGAACAGTTGGAGATTAACTTGGGTGGGCTCACAGTAGAAGAGGCAATTAGTGGTCACAGATTATTCATATTGGATTACCATGATGCATTCTTCCCGTATTTGACGAAGATAAACAGTCTACCTAATGCAAAAGCTTATGCCACAAGGACAATCCTTCTCTTGAAAGATGATGGATCTTTGAAGCCACTTGCTATCGAACTAAGCAAGCCTGCAACAGTGAGTAAAGTGGTGTTGCCTGCAATAGAAGGCGTTGAAAGTACAATTTGGTTGTTGGCCAAGGCTCATGTAATTGTGAATGACTCTGGTTATCATCAGCTCATAAGCCATTGGTTAAATACTCATGCAGTGATGGAGCCATTTGCCATAGCAACAAACAGACATCTGAGTGTGCTTCACCCTATTTATAAACTTCTTTACCCTCACTACAAGGATACCATAAATATCAATGGTCTTGCTAGGCAGTCCCTGATTAACGCAGGTGGCATTATTGAGCAAACATTTTTGCCTGGAAAGTACTCTATTGAGATGTCTTCAGTTGTTTATAAGAATTGGGTTTTCACTGACCAAGCATTACCAGCTGATCTAGTCAAGAGAGGATTGGCAGTTGAGGATCCCTCTGCACCCCATGGTCTTCGTCTTGTGATAGAGGACTACCCTTATGCTGTTGATGGACTTGAAATATGGGATGCTATTAAGACATGGGTCCAAGACTATGTCTCCTTGTACTATGCCACAGATGATGCAATCAAGAAAGACACTGAACTCCAAGCTTGGTGGAAGGAAGCTGTTGAGAAGGGTCATGGTGACTTGAAAGACAAGCCATGGTGGCCTAAAGTGCAGACTGTAGAGGATCTCATTAAGTCATGCTCTATTATCATATGGACAGCCTCGGCTCTTCATGCTGCTGTTAATTTTGGACAATATCCTTATGGAGGTTATATCGTGAACCGTCCAACTCTAGCAAGAAGGTTTATCCCAGAAGAAGGAACCACAGAATATGAGGAGATGGTGAAGAATCCTCAAAAGGCTTATCTGAGAACAATCACACCTAAGTTTGAGACCCTTATTGATATTTCAGTGATTGAGATATTGTCAAGGCATGCTTCTGATGAGGTCTACCTTGGGCAAAGGGATAATCCAAATTGGACTACTGATTCAAAGGCATTAGAAGTTTTCAAAAAGTTTGGAAACAAACTGGCAGAAATTGAGGGGAAAATCACAGCAAGGAACAATGATCCAAGTCTGAAAAGTCGACAGGGACCAGTTCAGTTGCCATACACATTGCTCCATCGTACAAGTGAGGAAGGAATGACTTTCAAAGGAATTCCCAACAGTATCTCCATCTAA 2586 0.4246 MIIGGILGGNKGQKIKGTVVLMPKNVLDFNAITSIGKGGVVDTATGLISSGVSLVGNAVDTVTSFAGRSISLRLISATQTDGSGKGKVGKEAYLENHLPNLPTLGARQDAFDVYFEYDANFGIPGAFYIKNFKTDEFFLVSVKLEDIPNHGTINFVCNSWVYNSKSYKKDRIFFLNDTYLPSATPAPLVKYRQEELEVLRGDGTGKRRDFDRIYDYDVYNDLGNPDGGDPRPILGGSSNYPYPRRVRTGREKTRKDPNSEKPGEIYVPRDENFGHLKSSDFLTYGIKSLSQNVIPLFKSVIFDLRVTSSEFDSFDEVRGLFEGGIKLPTNILSQISPLPVLKEIFRTDGENTLQFPPPHVIRVSKSGWMTDEEFARETIAGVNPNVIRRLEEFPPKSTLDPTLYGDQTSTITKEQLEINLGGLTVEEAISGHRLFILDYHDAFFPYLTKINSLPNAKAYATRTILLLKDDGSLKPLAIELSKPATVSKVVLPAIEGVESTIWLLAKAHVIVNDSGYHQLISHWLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYKDTININGLARQSLINAGGIIEQTFLPGKYSIEMSSVVYKNWVFTDQALPADLVKRGLAVEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVQDYVSLYYATDDAIKKDTELQAWWKEAVEKGHGDLKDKPWWPKVQTVEDLIKSCSIIIWTASALHAAVNFGQYPYGGYIVNRPTLARRFIPEEGTTEYEEMVKNPQKAYLRTITPKFETLIDISVIEILSRHASDEVYLGQRDNPNWTTDSKALEVFKKFGNKLAEIEGKITARNNDPSLKSRQGPVQLPYTLLHRTSEEGMTFKGIPNSISI 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0338 861 MobiDBLite consensus disorder prediction 245 266 - -
Aed2g0338 861 Pfam PLAT/LH2 domain 81 174 IPR001024 GO:0005515
Aed2g0338 861 Gene3D PLAT/LH2 domain 7 179 - -
Aed2g0338 861 PRINTS Plant lipoxygenase signature 171 192 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 241 260 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 308 329 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 353 369 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 459 483 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 392 411 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 774 788 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 210 226 IPR001246 GO:0016491
Aed2g0338 861 PRINTS Plant lipoxygenase signature 145 163 IPR001246 GO:0016491
Aed2g0338 861 Gene3D - 366 494 - -
Aed2g0338 861 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 12 179 IPR036392 GO:0005515
Aed2g0338 861 PANTHER SEED LINOLEATE 9S-LIPOXYGENASE 7 861 - -
Aed2g0338 861 Gene3D - 495 860 - -
Aed2g0338 861 ProSitePatterns Lipoxygenases iron-binding region signature 1. 517 531 IPR020833 GO:0016702|GO:0046872
Aed2g0338 861 Gene3D - 180 276 - -
Aed2g0338 861 ProSitePatterns Lipoxygenases iron-binding region signature 2. 544 554 IPR020834 GO:0016702|GO:0046872
Aed2g0338 861 SMART LH2_4 13 176 IPR001024 GO:0005515
Aed2g0338 861 MobiDBLite consensus disorder prediction 223 266 - -
Aed2g0338 861 SUPERFAMILY Lipoxigenase 180 861 IPR036226 -
Aed2g0338 861 Gene3D - 277 365 IPR027433 -
Aed2g0338 861 PRINTS Lipoxygenase signature 517 534 IPR013819 GO:0016702|GO:0046872
Aed2g0338 861 PRINTS Lipoxygenase signature 537 557 IPR013819 GO:0016702|GO:0046872
Aed2g0338 861 PRINTS Lipoxygenase signature 499 516 IPR013819 GO:0016702|GO:0046872
Aed2g0338 861 CDD PLAT_LH2 14 176 IPR042057 -
Aed2g0338 861 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 178 861 IPR013819 GO:0016702|GO:0046872
Aed2g0338 861 PANTHER LIPOXYGENASE 7 861 IPR000907 GO:0016702|GO:0046872
Aed2g0338 861 ProSiteProfiles PLAT domain profile. 48 175 IPR001024 GO:0005515
Aed2g0338 861 Pfam Lipoxygenase 188 843 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0338 Aed-Chr2 2241555 2246276 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0338 8 861 Acyl Lipid Metabolism Gene Families AT1G55020 56.164 0.0 985
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0338 K15718 - gmx:547856 1610.51