Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0337 ATGTTTTCAGGGGTGACAGGTCTGGTTAACAGGGGAAAGAAGCTGAAGGGGACAGTGGTGTTGATGCGCAAGAATGTGTTGGACATCAATGCCATCACCTCTGCTCAGAGTCCCACCGGCATCATCGGCGGCGCCATCGGTGCCGTTGGTGGTCTCATTGGCACCACCGTTGACACCCTCACTTCCTTTCTCGGCCGATCAGTGGCTCTCAAACTGATCAGTGCCACCAGTGCTGATTCATCTGGAAAGGGAAAGGTGGGAAAGCAAACATTTTTGGAAGGTCTCGTAGCTTCCTTACCAACCTTGCGAGCTGGAGAGTCTGCATTCGATCTTCATTTTGAATGGGACACTGACATGGGAATTCCTGGTGCATTTTACATCGAGAATTTCATGCAAGTTGAATTCTACCTTATCAGTTTGACTCTTGAAGACGTTCCTAACCACGGAACCATCCACTTTGTTTGCAACTCATGGGTTTACAATGACAAAAAATACAAAACTGACCGCATTTTCTTTGCCAACAAGACATACCTTCCAAGTGACACACCTGGTCCACTAGTGAAGTATAGAGAAGAAGAATTGAAGACTCTAAGAGGAGATGGAACAGGAGAGCGAAAAGAACATGAAAGAATCTATGACTATGATGTCTACAATGATTTGGGAACCCCCGATAAGGCTAATTTGGCTCGTCCAGTTCTTGGAGGATCCACCACCTTGCCTTACCCTCGCAGGGGAAGAACGGGTAGACCAAAATCTTCCAAAGATCCTAAGAGTGAGACACGCAGCGACTCTGTTTATATTCCGAGGGACGAATCATTTGGTCACTTGAAGTCATCGGATTTCCTTGTTTATATACTTAAATCTGCATCTCAAAATGTGATACCTCAGTTACAATCTGCACTTAGACTACAATTCAATGATCCTGAGTTTACTAGCTTTGATGACGTGCGTGGACTCTATGATGGTGGGATTAAGTTGCCTACTGATGCACTTAGCAAGCTTAGTCCTATACCATTGTTCACTGAACTCTTCAGAACTGATGGGGAACAGGCCCTTAAGTTTCCACCACCTAAAGTCATTCAAGTGAATCAATCTGGATGGATGACTGATGAAGAGTTTGCAAGAGAGATGATTGCTGGAGTAAATCCTCACATTATTAAAAAACTTCAGGAGTTCCCACCAAAGAGCAAGCTAGATAGCCAGCTCTATGGTGATAATACCAGTACAATAACCAGAGAACACGTGGAGCCTAACTTGGGTGGACTCACTGTAGAACAGGCTATCCAAAACAACAAATTGTTCATACTAGATCACCATGACACACTTATTCCATATTTGAGGCGAGTAAACGCAACTGATACAAAGGCCTACGCTACTAGAACCATCCTTTTCTTGCAAGATAATGGAACTTTGAAACCTTTGGCCATTGAGCTAAGTAAACCACATCCTCAGGGTGATAATTTTGGTCCTGTTAGCAATGTTTACCTTCCAGCAGAACAAGGTGTTGAAGCTTCCATTTGGCTACTTGCCAAGGCTTATGTGATCGTAAATGATGCTTGCTATCACCAACTTGTTAGCCATTGGTTAAACACCCATGCAGTTGTTGAGCCATTCGTGATAGCAACAAACAGGCATCTTAGTGCGGTGCATCCTATTCACAAACTTCTTCTTCCACACTATCGTGACACAATGAACATCAATGCACTCGCAAGGAATGTTCTGGTCAATGCAGAGGGTATTATAGAATCAACATTCTTGTGGGGAAAATATTCTTTGGAAATGTCTGCTGTTGTATACAAGGATTGGGTTTTCCCTGAGCAAGCACTACCTGCTGATCTTGTTAAGAGAGGTGTAGCTGTTGAGGATTCATCTTCTCCACATGGCCTTCGTCTTTTGATACAGGACTATCCTTATGCTGCTGATGGATTAGAGATATGGGCTACTATCAAGTCATGGGTGCAAGAATATGTCTTTTTCTACTACAAGTCTGATGCTGCTATTGCACAAGATACTGAACTCCAAGCCTTTTGGAAAGAACTTGTAGAGGTTGGTCATGGCGACAAGAAGAACGCGCCATGGTGGGTAAAGATGAAAACTCGCGAAGAGTTGATTGAATCTTGCACCACACTCATTTGGACTGCTTCAGCACTTCATGCAGCTGTTAACTTTGGACAGTATCCTTATGGTGGCTATATCCTTAACCGACCAACTCTTAGCAGGAGGTTCATGCCTGAGATAGGATCCCCTGAGTATGATGAGCTTGCTAAGAACCCTCAGAAGGCGTATTTGAAAACAATTACTGGGAAGAAGGATACCCTTACAGACCTTACAATTATAGAGGTCTTGTCAAGGCATGCTTCTGATGAGTTGTACCTTGGACAGAGAGATAGTGAGTTTTGGACTTCTGATTCACAACCATTAGAGGCCTTCAAGAGGTTTGGAAAGAAGTTGGCTGAGATTGAGCAAAAGCTCATCCAAAGGAATAATGATGAGACACTGAGGAACCGATATGGCCCTGTGAAGATGCCTTACACATTGCTTTATCCTTCTAGTGAGGAAGGTTTGACTTTCAGAGGCATTCCTAACAGTATCTCCATCTAA 2601 0.4368 MFSGVTGLVNRGKKLKGTVVLMRKNVLDINAITSAQSPTGIIGGAIGAVGGLIGTTVDTLTSFLGRSVALKLISATSADSSGKGKVGKQTFLEGLVASLPTLRAGESAFDLHFEWDTDMGIPGAFYIENFMQVEFYLISLTLEDVPNHGTIHFVCNSWVYNDKKYKTDRIFFANKTYLPSDTPGPLVKYREEELKTLRGDGTGERKEHERIYDYDVYNDLGTPDKANLARPVLGGSTTLPYPRRGRTGRPKSSKDPKSETRSDSVYIPRDESFGHLKSSDFLVYILKSASQNVIPQLQSALRLQFNDPEFTSFDDVRGLYDGGIKLPTDALSKLSPIPLFTELFRTDGEQALKFPPPKVIQVNQSGWMTDEEFAREMIAGVNPHIIKKLQEFPPKSKLDSQLYGDNTSTITREHVEPNLGGLTVEQAIQNNKLFILDHHDTLIPYLRRVNATDTKAYATRTILFLQDNGTLKPLAIELSKPHPQGDNFGPVSNVYLPAEQGVEASIWLLAKAYVIVNDACYHQLVSHWLNTHAVVEPFVIATNRHLSAVHPIHKLLLPHYRDTMNINALARNVLVNAEGIIESTFLWGKYSLEMSAVVYKDWVFPEQALPADLVKRGVAVEDSSSPHGLRLLIQDYPYAADGLEIWATIKSWVQEYVFFYYKSDAAIAQDTELQAFWKELVEVGHGDKKNAPWWVKMKTREELIESCTTLIWTASALHAAVNFGQYPYGGYILNRPTLSRRFMPEIGSPEYDELAKNPQKAYLKTITGKKDTLTDLTIIEVLSRHASDELYLGQRDSEFWTSDSQPLEAFKRFGKKLAEIEQKLIQRNNDETLRNRYGPVKMPYTLLYPSSEEGLTFRGIPNSISI 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0337 866 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 13 177 IPR036392 GO:0005515
Aed2g0337 866 MobiDBLite consensus disorder prediction 248 266 - -
Aed2g0337 866 CDD PLAT_LH2 13 174 IPR042057 -
Aed2g0337 866 Gene3D - 178 276 - -
Aed2g0337 866 Gene3D - 366 499 - -
Aed2g0337 866 MobiDBLite consensus disorder prediction 227 266 - -
Aed2g0337 866 PRINTS Plant lipoxygenase signature 169 190 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 240 259 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 391 410 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 779 793 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 307 328 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 352 368 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 457 481 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 143 161 IPR001246 GO:0016491
Aed2g0337 866 PRINTS Plant lipoxygenase signature 208 224 IPR001246 GO:0016491
Aed2g0337 866 Pfam PLAT/LH2 domain 78 172 IPR001024 GO:0005515
Aed2g0337 866 ProSiteProfiles PLAT domain profile. 45 173 IPR001024 GO:0005515
Aed2g0337 866 SMART LH2_4 13 174 IPR001024 GO:0005515
Aed2g0337 866 PANTHER LINOLEATE 9S-LIPOXYGENASE-4 7 866 - -
Aed2g0337 866 ProSitePatterns Lipoxygenases iron-binding region signature 1. 522 536 IPR020833 GO:0016702|GO:0046872
Aed2g0337 866 Pfam Lipoxygenase 186 849 IPR013819 GO:0016702|GO:0046872
Aed2g0337 866 ProSitePatterns Lipoxygenases iron-binding region signature 2. 549 559 IPR020834 GO:0016702|GO:0046872
Aed2g0337 866 SUPERFAMILY Lipoxigenase 178 866 IPR036226 -
Aed2g0337 866 Gene3D PLAT/LH2 domain 4 177 - -
Aed2g0337 866 Gene3D - 277 365 IPR027433 -
Aed2g0337 866 Gene3D - 500 865 - -
Aed2g0337 866 PRINTS Lipoxygenase signature 504 521 IPR013819 GO:0016702|GO:0046872
Aed2g0337 866 PRINTS Lipoxygenase signature 542 562 IPR013819 GO:0016702|GO:0046872
Aed2g0337 866 PRINTS Lipoxygenase signature 522 539 IPR013819 GO:0016702|GO:0046872
Aed2g0337 866 PANTHER LIPOXYGENASE 7 866 IPR000907 GO:0016702|GO:0046872
Aed2g0337 866 ProSiteProfiles Lipoxygenase iron-binding catalytic domain profile. 176 866 IPR013819 GO:0016702|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0337 Aed-Chr2 2225567 2229325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0337 1 866 Acyl Lipid Metabolism Gene Families AT1G55020 57.336 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0337 K15718 - gmx:100127400 1611.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed1g1341 1 12504855 12508401 Aed2g0337 2 2225567 2229325 PCT