Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0316 ATGACTATCCCTTCTATTTGGCTGTTAACTCTCTTTTCTGTCATTTTTTGCAGTGCAGCCTCCCATCAATATCTTTACAGAAATCTTCAGACTCTATCTTCTGATTCCTCCAATCAACCTTACAGAACTGCTTATCATTTCCAACCTCCCCAAAATTGGATAAATGGTAGACCATTGAGATATAGAGGACTTTATCACCTGTTCTATCAATACAATCCTAAAGGTGCAGCTTGGGGAAATATTGTGTGGGCACATTCAGTGTCAAAGGATCTTGTGAACTGGACACCACTAGATCCTGCCATCTTTCCATCTCAACCGTCCGATATAAATGGTTGTTGGTCAGGATCAGCCACACTGCTTCCTGGGAACAAACCAGCCATTCTTTACACTGGAATTGACCCATTGAATCACCAAGTTCAAAACTTGGCCCTACCCAAAAATTTGTCTGACCCATTTCTTAGAGAATGGATCAAGTCTCCCCAAAATCCTCTAATGGAACCAACTAGTGATAACAAGATCGACCCAGGTTCATTTAGAGACCCCACCACTGCATGGCTAGGCAAAGATGGGTATTGGAGAGTAGTTGTTGGAAGCAAAAGAGAAACTAGTGGAATTGCACTTTTGTATAGGAGCAAAGACTTTGTTAATTGGGTTCAAGCTGAACAACCTTTGCATTCAATCTTAGGAAGTGGAATGTGGGAGTGTCCTGATTTTTTTCCTGTTTTGAATGATGGCCAATTGGGTGGTGTTGACACGTCCGTGAATGGTGATGGTGTTAGGCACGTGTTCAAGGCTAGCTTGAGTGACAAGCAACGTGATTACTATTTGATTGGGAGTTACAATGCTAGTACCAACAAAGATGTATTTGTCCCGGATGAAGGGTCTAATGAATTTGTTTCAAGCTATGATTATGGGAATTACTATGCCTCAAAATCGTTTTTTGATGATGGGAAAAACAGAAGGATTTTGTTTGCGTGGGTCAAGGAATCATCAAGTTCTGATGATGATATGAAGAAAGGGTGGTCTGGAATCCATGCAATTCCAAGGGCTATATGGCTGCATAAGTCTGGCAAACAGTTATTGCAGTGGCCAGTGGTGGAAATGGAAAAGCTACGTTCATACCCAGTCAACTTGCCACCCCAAGTGCTAAAAGAAGGCGAGTTGCTTCCAATTAATGGTGTCACAGCGACACAGGCTGATGTTGAAATTTCATTTGAAGTGAAAAAATTGAGAAAGGCTGAAGTATTGGAGAATTGGACGGACCCTCAGATTCTGTGTAGTCAAAAGGGCTCATCTGTTAAAAGTGGATTTGGCCCGTTTGGTCTGTTAGCTCTTGCATCAGAGGGATTGGAAGAGTACACATCAGTTTTCTTCAGAATATTCAGATACCAAAACAAATATTTGGTGCTCTTGTGCAGTGATCAAAGCAGTTTGTCACTTCCATTTCCACAGATTGATCATTCTGTCGTGGAGAGTTTTGGGGGAGAAGGAAAGGCTTGCATCACAGCCAGAGTATATCCCACATTGGCAATCTATGATAAAGCACGACTTTATGCTTTCAATAATGGAACTTCTGATGTCATGATCACAAAACTGAATGCTTGGAGCATGAAGAAAGCACTAATCAATTGA 1632 0.4154 MTIPSIWLLTLFSVIFCSAASHQYLYRNLQTLSSDSSNQPYRTAYHFQPPQNWINGRPLRYRGLYHLFYQYNPKGAAWGNIVWAHSVSKDLVNWTPLDPAIFPSQPSDINGCWSGSATLLPGNKPAILYTGIDPLNHQVQNLALPKNLSDPFLREWIKSPQNPLMEPTSDNKIDPGSFRDPTTAWLGKDGYWRVVVGSKRETSGIALLYRSKDFVNWVQAEQPLHSILGSGMWECPDFFPVLNDGQLGGVDTSVNGDGVRHVFKASLSDKQRDYYLIGSYNASTNKDVFVPDEGSNEFVSSYDYGNYYASKSFFDDGKNRRILFAWVKESSSSDDDMKKGWSGIHAIPRAIWLHKSGKQLLQWPVVEMEKLRSYPVNLPPQVLKEGELLPINGVTATQADVEISFEVKKLRKAEVLENWTDPQILCSQKGSSVKSGFGPFGLLALASEGLEEYTSVFFRIFRYQNKYLVLLCSDQSSLSLPFPQIDHSVVESFGGEGKACITARVYPTLAIYDKARLYAFNNGTSDVMITKLNAWSMKKALIN 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0316 543 CDD GH32_Fruct1-like 52 353 - -
Aed2g0316 543 Gene3D - 375 481 - -
Aed2g0316 543 Gene3D - 483 537 - -
Aed2g0316 543 Pfam Glycosyl hydrolases family 32 C terminal 368 536 IPR013189 -
Aed2g0316 543 SUPERFAMILY Concanavalin A-like lectins/glucanases 364 540 IPR013320 -
Aed2g0316 543 Pfam Glycosyl hydrolases family 32 N-terminal domain 46 364 IPR013148 -
Aed2g0316 543 Gene3D Glycosyl hydrolase domain; family 43 50 374 IPR023296 -
Aed2g0316 543 SUPERFAMILY Arabinanase/levansucrase/invertase 40 360 IPR023296 -
Aed2g0316 543 SMART glyco_32 46 497 IPR001362 GO:0004553|GO:0005975
Aed2g0316 543 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 484 543 - -
Aed2g0316 543 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 3 480 - -
Aed2g0316 543 PANTHER CELL-WALL INVERTASE 3 480 - -
Aed2g0316 543 PANTHER CELL-WALL INVERTASE 484 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0316 Aed-Chr2 2089424 2092064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0316 61 543 Glycoside Hydrolase AT3G13790 59.417 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0316 K01193 - gmx:547681 880.552