Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0291 ATGGCTCAGCCACCGTTCGATCCGTACTACCTGTACCAAGCAGATGAGCGGAATAACATAAACACGCTGTTTGTCTCCGGTCTCCCAGACGACGTGAAGGCGCGTGAGATTCACAACCTCTTCCGCCGCCGCCCCGGCTTCGATTCCTGCCAACTCAAGTACACCGGCCGCGCCAACCAGGTCGTAGCGTTCGCCACGTTTTGCAACCACCCATCGGCAATGGCAGCATTGCACGCCTTGAATGGTGTGAAATTTGATCCTCAATCTGGATCTGTTTTACATCTTGAACTTGCCAGGTCAAATTCTAGGAGGAAGCGTAAACCAGGTGGTGGAGCCTACGTGGTTATAGATAAAAGGTCCAAAGGGGAGCCTAATCTTCAGGGATCATCAAGTGATGATGGTGACAGTGACCCTGATGAACCATCAGACAGTGGCGACAACCAGGGTGATTTAGCAACCATGACAAGTGATGAAACGGCTGTTGGTTCTGACAATGCTGTATCTGTGGAGCAACATGGAAAGGGCAGTGCCAGAGGACTGTGTTCCACTCTCTTTATCGCAAATCTTGGTCCAAATTGCACTCATGACGAATTGAAGCAGGTTTTTTCTGTATATACTGGATTCAACATGGTCAAAATGCGTTCTAGAGGAGGAATGCCTGTTGCATTTGCTGATTTTGAGGAATCTGACCAGGCTGCTAAAGTTCTGGAGGAGCTTCAGGGAAGCTTGCTGCCATCATCAGATCGGGGTGGCATGCACTTAGAGTATCTACTAATCTAA 780 0.4923 MAQPPFDPYYLYQADERNNINTLFVSGLPDDVKAREIHNLFRRRPGFDSCQLKYTGRANQVVAFATFCNHPSAMAALHALNGVKFDPQSGSVLHLELARSNSRRKRKPGGGAYVVIDKRSKGEPNLQGSSSDDGDSDPDEPSDSGDNQGDLATMTSDETAVGSDNAVSVEQHGKGSARGLCSTLFIANLGPNCTHDELKQVFSVYTGFNMVKMRSRGGMPVAFADFEESDQAAKVLEELQGSLLPSSDRGGMHLEYLLI 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0291 259 PANTHER U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B 11 251 - -
Aed2g0291 259 Gene3D - 15 103 IPR012677 -
Aed2g0291 259 Gene3D - 177 257 IPR012677 -
Aed2g0291 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 182 259 IPR000504 GO:0003723
Aed2g0291 259 CDD RRM_RBPMS_like 21 96 - -
Aed2g0291 259 SUPERFAMILY RNA-binding domain, RBD 20 244 IPR035979 GO:0003676
Aed2g0291 259 MobiDBLite consensus disorder prediction 99 153 - -
Aed2g0291 259 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 21 100 IPR000504 GO:0003723
Aed2g0291 259 SMART rrm1_1 183 255 IPR000504 GO:0003723
Aed2g0291 259 SMART rrm1_1 22 96 IPR000504 GO:0003723
Aed2g0291 259 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 184 245 IPR000504 GO:0003723
Aed2g0291 259 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 23 86 IPR000504 GO:0003723
Aed2g0291 259 PANTHER RNA-BINDING PROTEIN-RELATED 11 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0291 Aed-Chr2 1896049 1899158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0291 - - gmx:100783764 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0291 2 1896049 1899158 Aed2g0291 2 1896049 1899158 ECH