Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0287 ATGGCTTATTTTGAGAAAACAATAGATGATTTCTCATGGACTTGTCTGAAGGATTTTGATTTCACTTCTTTTTGTACTCAAAAGACCACAATAGACACTATAAATCTTCTTTTTGTGTGTGTCTTCTACACCTCTGTCATTATCAGTTCATTCAGAAGAAGTACTATAAGCGGTAATACTAGGAAAAGTTGGATTTTCCTTGTCGTTTCTATCTGCTGTGCTATTGTTAGCATTGCATTTTACACTATTGGCTTTTGGAATCTCATAGCCAAAACTGATAACTCTGTTCAGTTGAGCTGGTTAGCTTGCATTGTCAGAGGATTCATTTGGACTTCTTTGACAGTTTCTCTGCTTCTTCAGAGACACCATTGGATCAAAATTCTGAACTCTGTGTGGTGGACATGTTCCTGTGTACTGGTTTCAGCTCTCAACATTGAGATTCTAATTAGAAAGCATGCAATAGAAATTCTTGATATCGTACAATGGCTTGTACACTTCCTTCTTCTCTTCTGTGCCTTCCAAAACCTTTGTTACTTTGTCACTCAAAGTGTGCCAGAAAGCTTATCTGAGCCATTGTTAGCTCAGGAAGTTGACACCAAACAAACAGAACTAGGCCGTGCTAGCTTTCTCAGCAAATTGACATTCTCTTGGGTTAACTCTTTACTCAGTTTGGGTTACTCAAAGCCACTAGTTCTTGAAGACATCCCTTCCCTTCTTTCTGAAGATGAAGCAGAATTCACCTATCAAAACTTTATGCATACATGGGAATCCCTTGTAAGCGAGAGGAGCAAGGACAACACCAAAAACTTGGTTCTATGGTCTGTTGCTAGAACACACTTAAAAGAGAACATACTCATAGCTTTTTATGCACTACTCAGAACCATTGCTGTGTCTGTTTCTCCTTTAATACTCTATGCCTTTGTCAACTACTCAAATCGCACGGATACAGATATCAAAGAAGGTCTTTCCATAGTTGGTTTTCTTATTCTCTCAAAAGTGGTTGATTCTTTGTCCCAGAGACATTGGTTTTTTTATTCCAGGAGGTCAGGATTGAAAATGAGATCAGCTCTGATGGTGGCAGTGTATAAAAAACAGCTAAAGCTTTCTAGCTCAGCAAGGAGAAGGCACTCAACTGGTGAAATTGTGAATTATATCGCAGTTGACGCGTATCGAATGGGAGAATTTCCATGGTGGTTTCATATATCATGGACTTATGCAGTACAACTTGTTCTGTCTATTGGTGTTCTTTTCAGTGTTGTGGGTGTTGGTGCTCTTCCTGGTTTAGTCCCTCTTGTTATATGTGGACTTCTCAATGTACCATTTGCCAAAATCATACAAAGTTGTATGGCACAGTTCATGGTTTCACAGGATGAACGTCTTAGATCAACTTCAGAGATTCTAAATAGCATGAAAATCATTAAGTTACAATCCTGGGAGGACAAATTCAAGAATTTGGTTGAGAATCTACGTGCTAAAGAGTTCATTTGGCTGTCCAAGGCACAGATCATGAAAGCTTATGGCTCATTTCTCTATTGGATGTCTCCTACCATCGTTTCTGCTGTTGTTTTCCTCGGTTGTGCTATTTTCAACAGTGCCCCGTTGAATGCGAGAACAATTTTCACAGTTTTTGCAACTTTGAGGAACTTGTCAGAACCTGTTAGAATGATCCCAGAGGCTCTATCTATGGTGATCCAAGTTAAGATCTCCTTTGATCGTCTCAACACCGTTTTGCTTGATGAAGAGCTAGACAGTACCAATGGTAACAGAAGAAATATAAACCCAAGTTCAGTTAGTGCTGTGGAAATTCAAGCTGGTAACTTCATTTGGAATCACGAATCGGTAACCCCAACTTTAAGAGATGTAAATTTAGAAATCAAACGGGGACAGAAAATTGCAGTTTGTGGGTCAGTTGGAGCTGGAAAATCATCTCTTTTATTTGCAGTACTTGGAGAGATTCCCAAGATCTCAGGAACCGTTAATGTGTCTGGCACTGTAGCCTATGTTTCTCAAACTTCTTGGATTCAAAGTGGGACAGTTCGAGATAACATACTATTCAGCAAGCCAATGGACAAAACAAGATATGAGAATGCCATTAAAGTTTGTGCTTTAGATAAGGATATTAATAATTTTAGCCATGGTGATCTTACAGAAATTGGTCAACGAGGGATTAACATGAGTGGAGGACAAAAACAAAGGATTCAACTAGCTCGTGCAGTCTACAATGATGCTGACATCTATCTCCTTGATGACCCTTTCAGTGCAGTTGATGCTCAAACTGCTGCTATTCTGTTCAATGACTGTGTAATGAGGGCTCTAAGGGAGAAAACAGTTATTCTAGTGACTCATCAAGTGGAGTTTCTCTCAGAAGTTGATACAATCCTGGTAATGGAAGGTGGAAAAGTTACTCAATCAGGTAATTATGAGAATCTCTTGATAGCTGGAACAGCCTTTGAACAACTTGTGAGTGCTCATAAGGAAGCCATTTCAGAGTCGGAACAAAATAATGAAATCAAAACTCATACAGAAGAGTCTCAAGGTTTTTATCTCACTAAAAAACAAAGTGAGGGGGAGATTTCTAACAAGGGTCAACTTGGGGAACAGCTTACACAAGAAGAAGAAAAGGAGATTGGTGATGTTGGCTGGAAGACAATCTGGGATTATATTTCATTTTCCAGGGGTTCATTGATGCTGTGTTGGATCATATTGTTACAATTTGCTTTTGTTGCTTTGCAGACTGCATCAACGTTTTGGCTTGTTCTAGCCATTGAAATTCCACAATTAACTAGTGCCACCTTGATTGGAGTTTACTCGTTAATTTCATTTTCTGGTACTGCATTTGTATTTCTAAGGACTATCATTGGTGCACACCTCGGATTAAAAGCTTCTACAGCCTTTTTCTCAAGTTTCACTACTTCTATCTTCAATGCTCCAATGCTTTTCTTTGACTCAACCCCTGTAGGAAGGATCTTAACCCGAGCTTCATCAGATTTAACTACTTTGGACTATGATATACCCTTTTCCATCATTTTTGTAGTATCTATGCCAATTGAAATTTTGATGACAATTGGTATAATGGTTTACGTAACATGGCAAGTTCTCATTGTTGCTGTTCCAGCAATGGTTGCATCAAAATATGTTCTGGGATATTATCAAGCCTCAGCAAGGGAATTAATAAGGATCAATGGAACCACAAAAGCTCCTGTCATGAATTTTGCAGCTGAAACATCACTTGGTGTTGTCACTCTAAGAGCATTTAACATGGCAGACATATTTTATAAAAATTACTTAAAACTTGTGGACACAGACGCAACACTGTTCTTTCATTCTAATGTGGCCATGGAATGGTTAGTTTTAAGGATTGAAGCACTTCAAAACTTGACAGTCATAACTGCAGCTTTGTTACTTGTTCTAGTTCCTCAGGGATACGTGTCCCCAGGCCTTGTGGGGCTGTCTCTCTCTTATGCTTTCGCTGTGACAGGAACTCAAATATTTTGGACTCGATGGTATTGCAACTTATTAAACTATATTATCTCTGTTGAAAGAATCAAGCAATTCATTAACCTTCCAGAAGAACCTCCTGCCATTGTTGAGGACAAACGACCTCCATCTTCATGGCCTTCCAAAGGCAGGATTGACCTTCAAGCCTTGGAGATAAGATATCGTCCTAATGCTCCATTAGTGCTAAAGGGTATCACTTGTACCTTTAAGGAAGGGAGTAGAGTGGGAGTTGTAGGAAGAACTGGAAGTGGAAAAAGTACACTGATAAGTGCTTTGTTTCGCTTGGTTGAGCCAGCTAGAGGTGATATTCGTATAGATGGGATTGACATATGCTCAATGGGGTTGAAGGATTTGAGAATGAAACTAAGCATCATCCCTCAGGAACCAACTCTTTTCAAGGGAAGCATTAGAACCAACTTGGACCCTCTAGGCCTTTACTCAGATGATGATATATGGAAGGCTTTAGAGAAATGTCAGCTTAAGGAAACTATCAGCCGTCTACCACATCTCTTGGACTCTTCTGTGAGTGATGAAGGTGGAAATTGGAGCTTGGGACAGCGCCAACTGTTTTGTCTTGGAAGAGTTTTGCTTAAGAGGAACAGAATTCTGGTTCTGGATGAAGCTACTGCCTCCATTGACTCTGCCACAGATGTCATTCTACAACGAACAATTAGACAAGAATTTGCAGAATGCACAGTTATAACAGTGGCTCACAGGGTTCCAACTGTAATAGACAGTGACATGGTTATGGTCCTGTCCTATGGGAAAGTGGTGGAATATGAAGAGCCTTCAAAGCTGATGAACACCAACTCTTCATTCTCTAAGCTTGTAGCGGAGTATTGGTCCAGCCACAGGAAGAATTAG 4362 0.3973 MAYFEKTIDDFSWTCLKDFDFTSFCTQKTTIDTINLLFVCVFYTSVIISSFRRSTISGNTRKSWIFLVVSICCAIVSIAFYTIGFWNLIAKTDNSVQLSWLACIVRGFIWTSLTVSLLLQRHHWIKILNSVWWTCSCVLVSALNIEILIRKHAIEILDIVQWLVHFLLLFCAFQNLCYFVTQSVPESLSEPLLAQEVDTKQTELGRASFLSKLTFSWVNSLLSLGYSKPLVLEDIPSLLSEDEAEFTYQNFMHTWESLVSERSKDNTKNLVLWSVARTHLKENILIAFYALLRTIAVSVSPLILYAFVNYSNRTDTDIKEGLSIVGFLILSKVVDSLSQRHWFFYSRRSGLKMRSALMVAVYKKQLKLSSSARRRHSTGEIVNYIAVDAYRMGEFPWWFHISWTYAVQLVLSIGVLFSVVGVGALPGLVPLVICGLLNVPFAKIIQSCMAQFMVSQDERLRSTSEILNSMKIIKLQSWEDKFKNLVENLRAKEFIWLSKAQIMKAYGSFLYWMSPTIVSAVVFLGCAIFNSAPLNARTIFTVFATLRNLSEPVRMIPEALSMVIQVKISFDRLNTVLLDEELDSTNGNRRNINPSSVSAVEIQAGNFIWNHESVTPTLRDVNLEIKRGQKIAVCGSVGAGKSSLLFAVLGEIPKISGTVNVSGTVAYVSQTSWIQSGTVRDNILFSKPMDKTRYENAIKVCALDKDINNFSHGDLTEIGQRGINMSGGQKQRIQLARAVYNDADIYLLDDPFSAVDAQTAAILFNDCVMRALREKTVILVTHQVEFLSEVDTILVMEGGKVTQSGNYENLLIAGTAFEQLVSAHKEAISESEQNNEIKTHTEESQGFYLTKKQSEGEISNKGQLGEQLTQEEEKEIGDVGWKTIWDYISFSRGSLMLCWIILLQFAFVALQTASTFWLVLAIEIPQLTSATLIGVYSLISFSGTAFVFLRTIIGAHLGLKASTAFFSSFTTSIFNAPMLFFDSTPVGRILTRASSDLTTLDYDIPFSIIFVVSMPIEILMTIGIMVYVTWQVLIVAVPAMVASKYVLGYYQASARELIRINGTTKAPVMNFAAETSLGVVTLRAFNMADIFYKNYLKLVDTDATLFFHSNVAMEWLVLRIEALQNLTVITAALLLVLVPQGYVSPGLVGLSLSYAFAVTGTQIFWTRWYCNLLNYIISVERIKQFINLPEEPPAIVEDKRPPSSWPSKGRIDLQALEIRYRPNAPLVLKGITCTFKEGSRVGVVGRTGSGKSTLISALFRLVEPARGDIRIDGIDICSMGLKDLRMKLSIIPQEPTLFKGSIRTNLDPLGLYSDDDIWKALEKCQLKETISRLPHLLDSSVSDEGGNWSLGQRQLFCLGRVLLKRNRILVLDEATASIDSATDVILQRTIRQEFAECTVITVAHRVPTVIDSDMVMVLSYGKVVEYEEPSKLMNTNSSFSKLVAEYWSSHRKN 1453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0287 1453 CDD ABCC_MRP_domain2 1209 1429 - -
Aed2g0287 1453 Pfam ABC transporter transmembrane region 285 545 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0287 1453 Pfam ABC transporter transmembrane region 929 1159 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0287 1453 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 899 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0287 1453 Gene3D ABC transporter type 1, transmembrane domain 860 1192 IPR036640 GO:0005524|GO:0016021
Aed2g0287 1453 SUPERFAMILY ABC transporter transmembrane region 884 1193 IPR036640 GO:0005524|GO:0016021
Aed2g0287 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 602 823 IPR003439 GO:0005524
Aed2g0287 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1201 1444 IPR027417 -
Aed2g0287 1453 Gene3D - 606 852 IPR027417 -
Aed2g0287 1453 SMART AAA_5 627 800 IPR003593 -
Aed2g0287 1453 SMART AAA_5 1237 1428 IPR003593 -
Aed2g0287 1453 Pfam ABC transporter 618 752 IPR003439 GO:0005524
Aed2g0287 1453 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 63 1451 - -
Aed2g0287 1453 Gene3D ABC transporter type 1, transmembrane domain 253 583 IPR036640 GO:0005524|GO:0016021
Aed2g0287 1453 CDD ABC_6TM_ABCC_D2 893 1186 IPR044726 GO:0140359
Aed2g0287 1453 CDD ABCC_MRP_domain1 600 800 - -
Aed2g0287 1453 CDD ABC_6TM_ABCC_D1 285 573 IPR044746 GO:0140359
Aed2g0287 1453 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 599 822 IPR027417 -
Aed2g0287 1453 SUPERFAMILY ABC transporter transmembrane region 272 579 IPR036640 GO:0005524|GO:0016021
Aed2g0287 1453 Pfam ABC transporter 1228 1376 IPR003439 GO:0005524
Aed2g0287 1453 Gene3D - 1194 1445 IPR027417 -
Aed2g0287 1453 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 284 565 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Aed2g0287 1453 PANTHER NHPM BACTERIOCIN SYSTEM ABC TRANSPORTER, PEPTIDASE/ATP-BINDING PROTEIN-RELATED 63 1451 - -
Aed2g0287 1453 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1213 1445 IPR003439 GO:0005524
Aed2g0287 1453 ProSitePatterns ABC transporters family signature. 725 739 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0287 Aed-Chr2 1864933 1870553 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0287 581 844 Calmodulin-binding Proteins AT2G36910 27.143 2.67e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0287 - - gmx:100790301 2523.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0287 2 1864933 1870553 Aed2g0287 2 1864933 1870553 ECH