Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0261 ATGTGTTTCAACAAATGGTTCCATTTGTTCACTATCTTCCATGTCTTGGCTGCAACTCCAATCCTCTCATTAGCCGATTCCTCAAACCAACTCTCCACAAACTTTCTAGAACTTGCAAAGAAGCCAGAAGTGTTTGATTGGATGGTCAAAATCAGAAGGAAGATTCATGAGAATCCAGAGTTGGGATATGAGGAAGTTGAGACAAGTAAACTGATTAGAGAGGAGTTGGATAAACTGGAGTGGGAGCACAAGAGTAAAGTAGCTGGAAAGATGCACGCGTGTGGTCATGATTCTCATGTTGCTATGCTGCTTGGTGCTGCAAAGATTCTCAAACAATATGAAAAACAGTTGCAGGGAACTGTTGTTCTTGTGTTCCAACCAGCAGAGGAGGGAGGTGCAGGAGCTAAGAAAATTTTAGATGCTGGAGCCTTGGAAAATGTGACTGCTATCTTTGGTTTACATGTGACTCCTGATATTCCAATAGGTGAAGTGGCCTCTAGTTCTGGTCCAATATTGGCAGGAAGTGGTGTATTTGAAGCAACAATAAGAGGAAAGGGAGGCCATGCAGCTTTTCCCCAACTTTCTATAGACCCTGTCATGGCAGCTACCAATGTCATTATTAGCTTACAAAACCTTGTTTCTCGCGAGGCTAATCCTCTTGACCCTCAGGTTTTGACAGTTGCAAAGCTCCAAGGAGGTGATGCATTCAATGTAATTCCAGATTATGTCACAATTGGTGGAACCTACCGAGCTTTTTCTAGAGAAAAATTGGAGCACCTTAGACAGCGCATTGAGCAGGTTGTGATTGGTCAAGCTGCTGTGCTGAGGTGCAATGCAACAGTGAATTTCCTTGATGAAGAGAAACCTTTGTATCCTCCAACTATAAATGATGGTGACTTGCACAAGTTTTTTGTTGATGTAGCTGTGAATTTGCTTGGCATCAATAAAGTTAATACTGACAAGCATCAAGACATGGCTGCTGAAGACTTTGCGTTCTATCAAGAGGTCATACCTGGCTACTACTTCACTCTTGGAATGAAGAATGGTTCTTCATTTGAACCGGTTTCGCCATTGCACTCATCATATCTCGTAATCAATGAAGATGGACTTCCCTATGGAGCTGCACTTCATTCATCATTGGTCACTAATTCCTCAGACCTACTCTCCACTAACTTTCTGGACAGTGCCAAAAAGCCTGAAGTTTTTGATTGGATGGTCAGAATCAGAAGGAAGATTCATGAGAATCCAGAATTGCGTTACGAGGAGTTTGAGACAAGTAAACTGATTAGAGAGGAATTGGATAAACTGGGTATCCCTTATAAACACCCAGTGGCTGTCACTGGTGTTATTGGCTTCATAGGGACAGGAAACTCACCTTTTGTTGCAATAAGAGCTGATATGGATGCACTTCCCATCCAGGAAATGGTGGAGTGGGAGCACAAGAGTAAAGTACCTGGAAAGATGCACGCGTGTGGTCATGATGCTCATGTCACTATGCTTCTTGGTGCTGCAAATATTCTCAAACAGCACGAAAAAGAGATACATGGAACTGTTGTTCTTGTTTTCCAACCAGCAGAGGAGGGAGGTGCAGGGGCTAAGAAAATTTTAGATGCTGGAGCCTTAGAAAATGTTACTGCTATCTTTTGCTTACATGTGATGCCTGACATTCCAGTAGGTGAAGTGGCCTCTAAATCTGGTCCAATATTAGCAGGAGGTGGTGTCTTTGAAGCAATAATAAGAGGAAAGGGAGGTCATGCAGCTCTTCCCCAACATTCTATAGACCCCCTATTGGCGGCTTCTAATGTCATTATTAGCTTACAGCATCTTGTTTCTCGCGAGGCTGATCCTCTGGACCCGCAGGTTGTCACAGTTGCTAAGTTCCATGGAGGTGGTGCGTTCAATGTTATTCCAGATTATGTAACAATTGGTGGCACCTTCCGAGCTTTTTCTAGAGAAAGATTGGAGCAACTTAAACAGCGCATTAAGCAGAGGTGTAATGCAACTGTCAACTTCCTTGATGAAGCGAGACCTTTCTATCCTCCAACTGTAAATAATGGTGACTTGCACAAGCTTTTTGTTGATGTAGCTGGGAATTTGCTTGGCAGCAATAAAGTTAATATTGACAAGACACCAATCATGGCCGCTGAAGACTTTGCATTCTATCAAGAGGCCATACCAGGCTACTTTATCATGCTTGGAGTGAAGAGTGCTTCACTTCAGTCATATTTACACTCACCCTATCTCAATATCAATGAAGATGGACTTCCTTATGGAGCTGCTCTTCATGCGTCAATGGCTACTAGTTATCTTATAAAGTATCAGCAGGACGTAGCCAAGTTAGTTGGGAAATATCATGATGAATTATAA 2367 0.4267 MCFNKWFHLFTIFHVLAATPILSLADSSNQLSTNFLELAKKPEVFDWMVKIRRKIHENPELGYEEVETSKLIREELDKLEWEHKSKVAGKMHACGHDSHVAMLLGAAKILKQYEKQLQGTVVLVFQPAEEGGAGAKKILDAGALENVTAIFGLHVTPDIPIGEVASSSGPILAGSGVFEATIRGKGGHAAFPQLSIDPVMAATNVIISLQNLVSREANPLDPQVLTVAKLQGGDAFNVIPDYVTIGGTYRAFSREKLEHLRQRIEQVVIGQAAVLRCNATVNFLDEEKPLYPPTINDGDLHKFFVDVAVNLLGINKVNTDKHQDMAAEDFAFYQEVIPGYYFTLGMKNGSSFEPVSPLHSSYLVINEDGLPYGAALHSSLVTNSSDLLSTNFLDSAKKPEVFDWMVRIRRKIHENPELRYEEFETSKLIREELDKLGIPYKHPVAVTGVIGFIGTGNSPFVAIRADMDALPIQEMVEWEHKSKVPGKMHACGHDAHVTMLLGAANILKQHEKEIHGTVVLVFQPAEEGGAGAKKILDAGALENVTAIFCLHVMPDIPVGEVASKSGPILAGGGVFEAIIRGKGGHAALPQHSIDPLLAASNVIISLQHLVSREADPLDPQVVTVAKFHGGGAFNVIPDYVTIGGTFRAFSRERLEQLKQRIKQRCNATVNFLDEARPFYPPTVNNGDLHKLFVDVAGNLLGSNKVNIDKTPIMAAEDFAFYQEAIPGYFIMLGVKSASLQSYLHSPYLNINEDGLPYGAALHASMATSYLIKYQQDVAKLVGKYHDEL 788
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0261 788 CDD M20_IAA_Hyd 405 770 IPR044757 GO:0009850|GO:0016787
Aed2g0261 788 Pfam Peptidase dimerisation domain 575 667 IPR011650 -
Aed2g0261 788 Pfam Peptidase dimerisation domain 174 268 IPR011650 -
Aed2g0261 788 SUPERFAMILY Bacterial exopeptidase dimerisation domain 573 668 IPR036264 -
Aed2g0261 788 SUPERFAMILY Zn-dependent exopeptidases 43 382 - -
Aed2g0261 788 Gene3D Zn peptidases 21 81 - -
Aed2g0261 788 Gene3D Zn peptidases 266 390 - -
Aed2g0261 788 Pfam Peptidase family M20/M25/M40 80 381 IPR002933 GO:0016787
Aed2g0261 788 PANTHER AUXIN CONJUGATE HYDROLASE 382 788 - -
Aed2g0261 788 SUPERFAMILY Zn-dependent exopeptidases 400 771 - -
Aed2g0261 788 Gene3D - 570 679 - -
Aed2g0261 788 Gene3D Zn peptidases 405 754 - -
Aed2g0261 788 TIGRFAM amidohydrolases: amidohydrolase 80 372 IPR017439 GO:0016787
Aed2g0261 788 TIGRFAM amidohydrolases: amidohydrolase 405 757 IPR017439 GO:0016787
Aed2g0261 788 Gene3D Zn peptidases 82 227 - -
Aed2g0261 788 PANTHER AUXIN CONJUGATE HYDROLASE 80 383 - -
Aed2g0261 788 PANTHER AUXIN CONJUGATE HYDROLASE 1 79 - -
Aed2g0261 788 PANTHER PEPTIDASE M20 FAMILY MEMBER 80 383 IPR017439 GO:0016787
Aed2g0261 788 PANTHER PEPTIDASE M20 FAMILY MEMBER 382 788 IPR017439 GO:0016787
Aed2g0261 788 PANTHER PEPTIDASE M20 FAMILY MEMBER 1 79 IPR017439 GO:0016787
Aed2g0261 788 SUPERFAMILY Bacterial exopeptidase dimerisation domain 174 283 IPR036264 -
Aed2g0261 788 Pfam Peptidase family M20/M25/M40 462 766 IPR002933 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0261 Aed-Chr2 1699620 1706283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0261 K21604 - gmx:121172631 729.939