Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0237 ATGGGGGGCTCTGAAGGGGTGGGAGCATCATCGAAGCAATACGGTGTCACGAAGCCCATTTCAATGGCTGGCCCAACGGTTACTGATCTGCAAAGGACTCGTGAGTTAGAGAAGTTTCTCGCTGTTTCGGGGCTCTACGAGAGCAAGGAGGAAGCTGCCAAGAGAGAAGAGGTTCTTCACCGACTTGGACAGATAGTGAAAAATTGGGTGAAGCAACTTACCCGCCTAAGGGGATACACTGATCAAATGGTGGAAGATGCAAACGCTGTCATTTTGACTTTTGGTTCTTATCGGCTGGGTGTTCATGGTCCTGGGGCTGACTTAGACACTTTATGCATTGGTCCGTCCTATGTAAACCGGGAGGAGGATTTTTTCTATACATTGCATGATATTCTAGCTAACATGGAGGAAGTCACAGAATTGCAACCAATTCCGGATGCTCATGTCCCAGTTATGAAATTCAAGTTTGATGGAATATCAATTGACCTCCTTTATGCCAGTATTTCTCACTTGATTGTACCTGAAGACTTGGATATATCTGACGTCTCTGTTCTACACAATGTTGATGAGCCTACTGTGCGAAGTTTGAATGGATGTAGGGTTGCTGATCAAATTCTAAAGCTTGTTCCTAATGTTGAGCACTTTCGCACTACACTTCGTTGCTTGAAATTTTGGGCCAAAAGGCGAGGCATTTATTCCAACGTGACAGGTTTCCTTGGTGGTGTTAACTTGGCACTTCTTGTAGCTCGAGTGTGCCAGTTTTATCCAAATGCAGTTCCAAGTATGCTTGTTTCTAGATTCTTTAGGGTATATACACAGTGGCGGTGGCCAACTCCTGTCATGTTATGTCCAATAGAGGAGAATGAGCTAGGGTTTCCTGTTTGGCATCCTGGTAGAAATCCTCGTGACAGATCCCATCATATGCCAATTGTTACTCCTGCCTATCCCTGTATGAATTCTAGTTATAATGTTTCTACAAGCACACTTCGTGTAATGATGGAGCAGTTCCAATATGGCAACAAGATCTGTGGGGAAGTAGAACTGAATAAATCGTGTTGGAAGGCTCTGTTTGAACAGTACAGTTTCTTTGAAAGCTATAAAAACTACTTGCAAGTTGATGTAGTTGCTGCTGATGCTGATGACTTGCGCAGTTGGAAAGGTTGGGTTGAATCACGCCTTCGGCAATTAACCTTGATGATTGAGCGTGACACTTTTGGGAAGTTGCAATGTCATCCCTATGATCATGAATATATGGATACTTCAAGGCAGTGTGCACACTGTGCTTTCTTTATGGGTTTACAGAGGAAACAAGGAGAGGTTGTTCAAGAAGGTCAGCAATTTGATATACGAGGGACAGTTGAAGAATTTCGGCATTCTGTTACTATGTACATGTTCTGGAAACCAGGAATGGAGATTTATGTTTCTCATGTTCGTAGAAAGCAAATTCCATGTTATGTGTTTCCTGATGGTTATAAACGATCCCGACCATCAAGGCCAACAACACAACTTGAGAATCATAAATCATTTCATAAGGATGAGGATTCTGGGACTGAACATGTTGAGACAATCCGTAAGAGGAAGAACAGTGACGGCGTGGATATGAGGGGGGATGCTATGCTTAAAAGGCAATCTGCTAGTCCTCCTGAGGATAGATTGGCAAGACGCAGCAGCCTTGGTACTGGTGGTTTGTCTGTTGATGCTGTATCTGATAGTCAAGAGTTGAGAAATGTGGAGTGCAATCATTTGTCGAACAGTGGGCAAGAAGAGTTGGATAGAACGGAGTCTCCTGAACCTGCTTCTAATTCTAGTGTGATTACATCGGTTACAAGTGACAGTGGTTCTTCTGAAGATATTGGATTTGTATCAGTGGCAGGTTGTGTTGAGGATAACACCAGGGTTGTTGAAATGAACAATGGCAGGTTTGAGGATACTACATATGGGAATGATTCCGTCACAATGGTGAAAAAGATAGTGGCAAGTGGAAATGAAGTATTTCAACATGAGTTGCAGCCAAATGCAATGCTAGGGATGGTTCTTGATTCTGCAGAAAAGGTTCTTTCAGAAGCTGTGCAAGAGCCGGTTTTAAGGCATGTCCATGAGATTCAGTGTAGCTTCGACAGTGTGAATTGTGCGGTGGAGAAAGAAGTGAGCCAGCAATTTGGGTAA 2166 0.434 MGGSEGVGASSKQYGVTKPISMAGPTVTDLQRTRELEKFLAVSGLYESKEEAAKREEVLHRLGQIVKNWVKQLTRLRGYTDQMVEDANAVILTFGSYRLGVHGPGADLDTLCIGPSYVNREEDFFYTLHDILANMEEVTELQPIPDAHVPVMKFKFDGISIDLLYASISHLIVPEDLDISDVSVLHNVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGIYSNVTGFLGGVNLALLVARVCQFYPNAVPSMLVSRFFRVYTQWRWPTPVMLCPIEENELGFPVWHPGRNPRDRSHHMPIVTPAYPCMNSSYNVSTSTLRVMMEQFQYGNKICGEVELNKSCWKALFEQYSFFESYKNYLQVDVVAADADDLRSWKGWVESRLRQLTLMIERDTFGKLQCHPYDHEYMDTSRQCAHCAFFMGLQRKQGEVVQEGQQFDIRGTVEEFRHSVTMYMFWKPGMEIYVSHVRRKQIPCYVFPDGYKRSRPSRPTTQLENHKSFHKDEDSGTEHVETIRKRKNSDGVDMRGDAMLKRQSASPPEDRLARRSSLGTGGLSVDAVSDSQELRNVECNHLSNSGQEELDRTESPEPASNSSVITSVTSDSGSSEDIGFVSVAGCVEDNTRVVEMNNGRFEDTTYGNDSVTMVKKIVASGNEVFQHELQPNAMLGMVLDSAEKVLSEAVQEPVLRHVHEIQCSFDSVNCAVEKEVSQQFG 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0237 721 Pfam Poly(A) polymerase central domain 15 359 IPR007012 GO:0004652|GO:0043631
Aed2g0237 721 SUPERFAMILY PAP/OAS1 substrate-binding domain 210 358 - -
Aed2g0237 721 CDD NT_PAP_TUTase 54 209 - -
Aed2g0237 721 MobiDBLite consensus disorder prediction 491 614 - -
Aed2g0237 721 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 360 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Aed2g0237 721 MobiDBLite consensus disorder prediction 562 584 - -
Aed2g0237 721 Pfam Nucleotidyltransferase domain 88 163 IPR002934 GO:0016779
Aed2g0237 721 Gene3D Beta Polymerase, domain 2 47 203 IPR043519 -
Aed2g0237 721 MobiDBLite consensus disorder prediction 504 537 - -
Aed2g0237 721 PANTHER POLY A POLYMERASE 1 595 - -
Aed2g0237 721 MobiDBLite consensus disorder prediction 596 614 - -
Aed2g0237 721 Gene3D Poly(A) polymerase predicted RNA binding domain 361 477 - -
Aed2g0237 721 Gene3D - 15 357 - -
Aed2g0237 721 SUPERFAMILY Nucleotidyltransferase 12 208 IPR043519 -
Aed2g0237 721 PANTHER NUCLEAR POLY(A) POLYMERASE 4 1 595 - -
Aed2g0237 721 Pfam Poly(A) polymerase predicted RNA binding domain 361 420 IPR007010 GO:0003723|GO:0043631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0237 Aed-Chr2 1578784 1583744 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0237 K14376 - gmx:100783237 1285.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0237 2 1578784 1583744 Aed2g0237 2 1578784 1583744 ECH