Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0200 ATGTCCAAATACACAGACATCATAATCATATCATACTTAACTTTTTTGTTTTGTTTTTTAGTGAAAACACTAAAGTACACGTATACATGCGAAATCTATGTACTGCGTGGAAAGGTGCTAGCTGGCGAATTTTGGAGTAGTTTTCTATCGTTTTGCCATGCGGGGACGACAGCGACTTCTGTTCGTATACCAAATGCCAAACCTTCTTGGCAGCGCTCTTTGCGGCATGTAGTTGTGGCTTCCCTTTCTTCATTCTTGTATGGATACCATATTGGAGTAGTCAATGAAACCCTAGAGAGCATTTCCATAGATCTTGGCTTTAGTGGGAATACAATGGCTGAAGGTCTTGTAGTAAGTATATGTTTAGGAGGTGCTTTTATTGGATCTATGTTCAGTGGATGGATTGCAGATGGTGTTGGGCGTCGAAGAAGTTTTCAGTTGTGTGCTTTACCTATGATAATTGGGGCTGGAATGAGTGCAACAGCAAAAACTCTGTGGGGCATGCTTTTGGGAAGGTTATTTGTTGGTACTGGAATGGGACTTGGCCCACCTGTTGCAGCTCTTTACGTGGCTGAGATCTCACCTCCAGCTGTACGAGGTGCTTTTGGGGCCTTAACCCAAATTGCAACATGTCTTGGACTCATGAGTGCTCTCTTTATTGGAATCCCAGCCAAGGATATAGTTGGTTGGTGGCGGAATTGTTTCTGGGTATCTGTCATTCCTGCTACAATACTTGCCCTATTTATGGAGATCTGTGCAGAGAGTCCTCATTGGCTTTTCAAGAGAGGAAGAACCATTGAAGCTGAAGCTGCATTTGAGAAGCTCTTGGGAGGAGTACATGTGAAAACTGCAATGACTGAACTGTCAAAGTCTGACAGAGGTGATGGATCTGATACAGTAAGACTTTCAGAATTAATCTGTGGCCGCTATTTCAGAGTGATGTTCATTGGATCTACACTTTTTGTGTTGCAGCAGCTATCTGGCATAAATGCTGTTTTCTATTTCTCTTCAACTGTCTTTGAAAGTTTCGGTGTACCATCTGATATTGCAAACACATGTGTAGGAGTTTGCAATTTATTGGGGTCAGTAGGTGCAATGATTCTGATGGATAAACTTGGAAGGAAAGTGCTTCTCCTGGGTAGCTTTCTGGGCATGGGGTTATCAATGGGTCTACAAGTCATCGCTGCAAGTTCTTTTGCATCAGGGTTTGGAGCAATGTATCTATCTGTTGGTGGCATGTTACTGTTTGTGCTGTCATTTGCTTTGGGCGCTGGTCCAGTTCCTTGTCTTATTATGTCTGAAATACTACCAGGCAATATCAGAGCAAAGGCAATGGCAATTTGCCTGGCTGTGCATTGGGTGATAAACTTCTTCGTGGGTCTATATTTTTTGCGCTTGCTGGAGCTAATTGGGGCGCAACTCGTGTATAGTATTTTTGGTTCATTTTCTTTGATAGCGGTGGTTTTTGTGAAGAAATATATTCTGGAAACAAAAGGGAAGTCACTTCAGGAAATTGAAATTGCACTTCTTGCACTAGAAGCAAACTAA 1548 0.4238 MSKYTDIIIISYLTFLFCFLVKTLKYTYTCEIYVLRGKVLAGEFWSSFLSFCHAGTTATSVRIPNAKPSWQRSLRHVVVASLSSFLYGYHIGVVNETLESISIDLGFSGNTMAEGLVVSICLGGAFIGSMFSGWIADGVGRRRSFQLCALPMIIGAGMSATAKTLWGMLLGRLFVGTGMGLGPPVAALYVAEISPPAVRGAFGALTQIATCLGLMSALFIGIPAKDIVGWWRNCFWVSVIPATILALFMEICAESPHWLFKRGRTIEAEAAFEKLLGGVHVKTAMTELSKSDRGDGSDTVRLSELICGRYFRVMFIGSTLFVLQQLSGINAVFYFSSTVFESFGVPSDIANTCVGVCNLLGSVGAMILMDKLGRKVLLLGSFLGMGLSMGLQVIAASSFASGFGAMYLSVGGMLLFVLSFALGAGPVPCLIMSEILPGNIRAKAMAICLAVHWVINFFVGLYFLRLLELIGAQLVYSIFGSFSLIAVVFVKKYILETKGKSLQEIEIALLALEAN 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0200 515 TIGRFAM SP: MFS transporter, sugar porter (SP) family 77 505 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed2g0200 515 PANTHER - 61 512 IPR045263 -
Aed2g0200 515 ProSitePatterns Sugar transport proteins signature 1. 132 149 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed2g0200 515 ProSiteProfiles Major facilitator superfamily (MFS) profile. 76 498 IPR020846 GO:0022857
Aed2g0200 515 PRINTS Sugar transporter signature 410 431 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed2g0200 515 PRINTS Sugar transporter signature 324 334 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed2g0200 515 PRINTS Sugar transporter signature 169 188 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed2g0200 515 PRINTS Sugar transporter signature 433 445 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed2g0200 515 PRINTS Sugar transporter signature 84 94 IPR003663 GO:0016020|GO:0022857|GO:0055085
Aed2g0200 515 ProSitePatterns Sugar transport proteins signature 1. 365 381 IPR005829 GO:0016021|GO:0022857|GO:0055085
Aed2g0200 515 PANTHER PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED 61 512 - -
Aed2g0200 515 CDD MFS_GLUT_like 79 496 - -
Aed2g0200 515 Pfam Sugar (and other) transporter 77 507 IPR005828 GO:0016021|GO:0022857|GO:0055085
Aed2g0200 515 Gene3D MFS general substrate transporter like domains 69 509 IPR036259 -
Aed2g0200 515 SUPERFAMILY MFS general substrate transporter 66 506 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0200 Aed-Chr2 1305179 1312471 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0200 62 454 Organic Solute Cotransporters AT1G67300 68.608 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0200 - - gmx:100811182 814.298