Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0196 ATGGTTAAAGCACAGGAACAAGAACAGGAAAGCCTCAGGTCCAAACTATTCCATTTCAAAGGAATGTTTGAGAATGCAGGGAGGCATACAAAGAGTTTGAGCATTGAGAGTGCCACTGTATTAGATCCTTCTCCTTCGGAAGAAGAGCCATTGTCATCAAGAAGCCAAGGATCAAAACCTCTAAATGATCTGGATAAGGTTCCTATTCCTACTCCTAAGCCAAAGATAAGCAAGGAGGAAATTGTAGCCAAAGAAGCCAAAGATAAGATGGTGCAAGAAATGGAACAGATGAAGGAGAGATTTGCTAAACTGCTGTTGGGGGAGGACATGTCTGGTGGAGGAAAGGGTGTTTCTTCAGCTTTGGCATTGTCAAATGCATTCACAAACCTTGCAGCTGCTGTTTTTGGTGAACAAAAGCGCCTAGAGCCAATGCCGCCAGAAAGGAAAGCACGATGGAGAAAAGAAATTGATTGGCTTCTATCGGTTACCGATTACATTGTTGAAATGGTTCCTGTGCAACAAAAAAACAAGGATGGCTCAACCATGGAGGTTATGACAACACGACAAAGAACTGATCTCCACATGAATATCCCTGCCTTACGAAAGCTTGATACAATGCTTATTGATACTCTAGATAACTTCAAAGACCAAAATGAGTTCTATTATGTAACAAAAGATGCAGAGGAAGCAGATAGAAATAATGATACCAAGTGGTGGTTGCCTACACCTAAGGTTCCCCCAGAGGGTTTATCTGATGGAGCAAGAAGGTTTGTTCAGTATCAGAAAGATTGTGTGAACCAAGTTCTTAAAGCAGCTATGGCCATAAATGCTCAAACTCTATCAGAAATGGAGATCCCTGAAAGCTATATTGAATCCCTACCCAAGAATGGAAGATCAAGTCTAGGGGACTTGATCTACAGGAGCATTACAGATGATTTTTTCGATCCTGATCAGCTCCTATCAGCTATGGACATGTCATCAGAACATAAAATCGTAGATCTCAAGGACAGAATTGAGGCATCCATTGTGATTTGGAGACGGAAGATGAACCAAAAAGATAGTAGCAAATCATCTTGGGGTTCTGCTGTGAGTATGGAGAAAAGAGAAATCTTTGAAGACAGGGCAGAAACCATCTTACTTCTCCTAAAGCATCGTTTTCCTGGGACTCCTCAATCTGCATTGGATATAAGCAAAATCCAATTCAGTGGGGATGTGGGGCATGCTGTTCTTGAAAGTTATTCAAGAATATTGGAAAGTTTGGCCTTCACAGTGCTGTCAAGAATAGAAGATATACTCCATGCAGATCAGGCAACTCAAAATCCACCATCATCGGGAAGGAGCGTTTCGAGAAACTCAATTCCCAAGCCAGAGAAGTCTCCAACTCTTAAAGAAGATAGTGGCTCAGAAGCAATGACACTATCAGATTTCATGGGTTGGGATCAAGGTGACTCAGACGCCAAGAAAGATGCAGATTCAGATGACAATGTTGATAATGGAAAGCCCCAAAAACTTCCAAACGTAGTGACCGACAAGAAGGTGTCGTACCTTGAGACATTGGGAGGAGGTATGAGGAGTCCAACATCACGCCATTAA 1593 0.4212 MVKAQEQEQESLRSKLFHFKGMFENAGRHTKSLSIESATVLDPSPSEEEPLSSRSQGSKPLNDLDKVPIPTPKPKISKEEIVAKEAKDKMVQEMEQMKERFAKLLLGEDMSGGGKGVSSALALSNAFTNLAAAVFGEQKRLEPMPPERKARWRKEIDWLLSVTDYIVEMVPVQQKNKDGSTMEVMTTRQRTDLHMNIPALRKLDTMLIDTLDNFKDQNEFYYVTKDAEEADRNNDTKWWLPTPKVPPEGLSDGARRFVQYQKDCVNQVLKAAMAINAQTLSEMEIPESYIESLPKNGRSSLGDLIYRSITDDFFDPDQLLSAMDMSSEHKIVDLKDRIEASIVIWRRKMNQKDSSKSSWGSAVSMEKREIFEDRAETILLLLKHRFPGTPQSALDISKIQFSGDVGHAVLESYSRILESLAFTVLSRIEDILHADQATQNPPSSGRSVSRNSIPKPEKSPTLKEDSGSEAMTLSDFMGWDQGDSDAKKDADSDDNVDNGKPQKLPNVVTDKKVSYLETLGGGMRSPTSRH 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0196 530 Gene3D PRONE domain, subdomain 2 284 401 - -
Aed2g0196 530 ProSiteProfiles PRONE domain profile. 84 445 IPR005512 GO:0005085
Aed2g0196 530 Gene3D PRONE domain, subdomain 1 98 436 - -
Aed2g0196 530 MobiDBLite consensus disorder prediction 481 498 - -
Aed2g0196 530 MobiDBLite consensus disorder prediction 28 73 - -
Aed2g0196 530 MobiDBLite consensus disorder prediction 436 456 - -
Aed2g0196 530 MobiDBLite consensus disorder prediction 435 511 - -
Aed2g0196 530 MobiDBLite consensus disorder prediction 30 60 - -
Aed2g0196 530 Pfam PRONE (Plant-specific Rop nucleotide exchanger) 92 439 IPR005512 GO:0005085
Aed2g0196 530 PANTHER RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 92 530 - -
Aed2g0196 530 PANTHER ROP GUANINE NUCLEOTIDE EXCHANGE FACTOR 1 92 530 IPR038937 GO:0005085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0196 Aed-Chr2 1283168 1286165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0196 - - gmx:100812078 916.761