Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0193 ATGGCATCTCGCCGCCGCATGTTATTGAAGGTCATAATCCTCGGAGACAGCGGGGTTGGTAAAACATCATTGATGAATCAGTATGTGAATCGTAAATTTAGTAATCAGTATAAGGCAACCATCGGTGCAGATTTTCTTACCAAGGAAGTTCAGTTTGAAGATAGGTTGTTCACGTTGCAGATTTGGGATACTGCTGGTCAAGAGCGGTTTCAGAGTCTTGGCGTGGCTTTCTACCGGGGTGCAGACTGCTGTGTCCTTGTTTATGATGTAAACGTCATGAAATCCTTTGACAACCTTAACCACTGGCGAGAAGAATTTCTTATTCAGGCTAGTCCATCTGATCCTGAAAACTTCCCATTTGTTGTCTTGGGAAACAAAATAGACGTTGATGGTGGAAATAGCAGAGTTATTTCTGAGAAGAAAGCAAAGGCATGGTGTGCTTCAAAGGGAAACATACCATACTTTGAGACCTCAGCAAAGGAAGGATTTAATGTTGAAGCTGCTTTCCAGTGCATAGCAAAAAATGCACTCAAGAATGAACCTGAAGAAGAGATGTACCTGCCTGACACAATTGATGTTGGTGGCGGTGGTGGTGGACGACAGCAGAGATCTACTGGCTGTGAATGTTGA 630 0.4349 MASRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPFVVLGNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEMYLPDTIDVGGGGGGRQQRSTGCEC 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0193 209 ProSiteProfiles small GTPase Rab1 family profile. 4 209 - -
Aed2g0193 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 186 IPR027417 -
Aed2g0193 209 SMART ras_sub_4 6 179 - -
Aed2g0193 209 SMART ran_sub_2 14 193 - -
Aed2g0193 209 CDD Rab7 9 182 - -
Aed2g0193 209 PANTHER OS05G0516600 PROTEIN 1 207 - -
Aed2g0193 209 SMART rab_sub_5 9 179 - -
Aed2g0193 209 ProSiteProfiles small GTPase Ras family profile. 3 209 IPR001806 GO:0003924|GO:0005525
Aed2g0193 209 ProSiteProfiles small GTPase Rho family profile. 2 176 - -
Aed2g0193 209 SMART rho_sub_3 11 179 IPR001806 GO:0003924|GO:0005525
Aed2g0193 209 PRINTS Transforming protein P21 ras signature 50 72 - -
Aed2g0193 209 PRINTS Transforming protein P21 ras signature 32 48 - -
Aed2g0193 209 PRINTS Transforming protein P21 ras signature 116 129 - -
Aed2g0193 209 PRINTS Transforming protein P21 ras signature 154 176 - -
Aed2g0193 209 PRINTS Transforming protein P21 ras signature 9 30 - -
Aed2g0193 209 Gene3D - 1 190 IPR027417 -
Aed2g0193 209 Pfam Ras family 10 177 IPR001806 GO:0003924|GO:0005525
Aed2g0193 209 PANTHER RAB FAMILY 1 207 - -
Aed2g0193 209 TIGRFAM small_GTP: small GTP-binding protein domain 10 172 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0193 Aed-Chr2 1275723 1278171 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0193 K07897 - gmx:100783389 417.542