Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0189 ATGGAAGCGAAAGAAGGAACGCTAAAATTCCCAGGGTTTCCTTTCGAACCGTATTCGATTCAGATTGATTTCATGAACAGTTTGTATGAATCTCTCAATCATGGTGGCGTGTCTATGTTGGAGAGCCCAACTGATGAGTGTGTGATTGGGCCTATTATGTATGTTGGAGCAGGGACTGGGAAGACCATGAGTGTGATTTGCAGTGCCTTGCAATGGGTGCTTGATCGGAGGCTGCAACAGGAAGCAGAATTAGGTGATGATAGAGGGAATGGGAATGACGGTGGCGACGGTTCGGATGATGAACCTGATTGGATGAGGGACTTCGTTATCGACAAAGAGGAGAAGAAGAAGAAGAAGAAGAATGAAGAGAAGTGTGGGTCTGTGTGGGGGAAACTTCATAGTAAGAAGAAGAGTAAGGAAATTTCCAAGGATTTTAGGATTATGGGCGTTGGAGAGGAAAATGGGTGTGGGAGTTTGCAAAAGAAAATTGATGCTGTGGAAATCAAAGTAGTTGCACTTGGAAACTCCGCACGCATAAATGAGCGATGCTTGGAACTCCAGAAGAAAAAGAAAAATGAACCTACAAAAGTTAAGGTGCGTGGGGTTTGTATTTTAGGCTATGATCTTCAGTTGAGCTACCAAGTATCCTCCATCTTGAACTTAAAAGTAGGTGCAGGGGTACGCAGAACAAAGGCCTCGTCTGGCTGCCCAATGCTTAGAAAACATAAAGTTCAACGAGAATTTAGGAATGAGGTATCTCAACAAGGGCCTTTGGATATTGAAGATCTTGCTAATCTTGGAAGAACTATGGGAACATGCCCATACTATGGCTCTAGAAGCATGGTTCGGAGAGCTGATCTTGTGGTCCTACCATATCAATCTCTTCTGTCTAAATCATCTCGAGAAGCACTTGGTCTGAATTTGAAATCCAATATTGTTATAATAGATGAGGCTCATAATTTAGCTGATTCACTCATCAACATGTATGACTCCAAAATTAGTTTATCACAGTTGGAGACTGTGCACAGCCATGTGGAACGGTACTTTGTGAGATTCCGAAATCTTTTGGGACCTGCTAATCGGAGATATATTCAAACTCTGATGGTTCTCATGCAAGCTTTTCTCCGAGTATTACTTGATGATAAAGATGGAAATCTTATAGATTCTTGCCGTGATATAGATCAAGTTTCTGAAGAAAGTAGAGCCTCTGATTTTACTATGGCCATCAATGATTTTTTATTTGAACTAAATATAGACAATATCAACTTGGTCAAACTGTCAAAGTATATAAAGGAAAGTAATATCATGAACAAGAATGCCAACAATGCTTCTGAATTTTCTGTTGTCATTGTTAGTGGTTATGGAGAAAAGCTGTCTACCTTTGAGAAAATGCCAACACTCCATAAAATGGAGGAACATGCCGAGGAGGGAAGCTGCGTATCTGCTTTCCAAGCCTTAGCTGGCATATTGCTATCGTTGACAAACAATGATGGTGATGGAAGGATAATCATTTCCAGGTCTAGGTCAACAAGCCTCAGGAAGCAAGGAGGATATATGAAGTATGTTATGCTCAGTGGAGAGAAGATTTTTTCCGAGATTGTAGATGAAGCACATGCCGTTGTATTAGTAGGGGGAACACTTCAACCTATAGAAGAGACAAGGGAGCGACTCTTTCCGTGGTTACCACCAAATCAGTTGCATTTCTTTTCATGTGGTCATATTGTCCCTCCCGATAGCACTATGCCAATTGCAGTTGCACGTGGGCCTACTGGACGCTCCTTCGATTTTAGCTTCAGCTCCAGGAGCTCACCAGACATGATGCGAGAACTTGGTCTTTTGCTATGTAATTTGGTGACTGTGGTTCCCGAAGGAATTGTAGTCTTCTTCCCTTCTTTTGATTATGAAAATAGAGTCTATGAACATTGGGGGTCATCTGGCATCCTTGAAAGGATTACAAAGAGAAAGCGTGTCTTTAGGGAGCCTAGAAATAACATGGATGTTGAATCTGTTCTCAAGGAATATAAAGATACCATTGATACATTATCGGTTATGAATTCAGAAGTAAACCAAGCATCTCATAGTGGTGCAATACTCCTTGCTGTTGTTGGTGCGAAGTTATCTGAAGGGATCAACTTAAGTGATGGGATGGGCCGATGTATAGTCATGGTTGGACTGCCATATGCTAGCCCGTCTGACATTGAATTGTTGGAGAGGATTAAGCACATTGAAGGTTTTCAAAAATTTAACCTTCCTGAAAATCCTAGCATTTCTGCCAGTTATAATCTATACAGTGGTGATGTACAAGGTGGTTTTGACATTTTAAGAAGTTGCAGTCACAGAGGAAAAGAGTACTATGAGAATCTCTGCATGAAAGCTGTAAATCAATCAATAGGTAGAGCAATCCGTCACATTAATGACTATGCAGCAATTTTGTTGGTTGACACAAGGTTTGCATCTGATTCCTCAAAACGGAGCTTTTCCCACCCAGTCACCAAGCTCCCCCAGTGGATAAAAGATCGTCTTGTTTCTTCTACCATTACCTATGGGGAGGTGCATAGGTTGTTGCATCAGTTTTTCAAACTCAAAAAACATGCTGCCATTAGTCCCTTCAGCAGATCTTGTAAAAAGTCCCATTATATTAATTTATAA 2649 0.4111 MEAKEGTLKFPGFPFEPYSIQIDFMNSLYESLNHGGVSMLESPTDECVIGPIMYVGAGTGKTMSVICSALQWVLDRRLQQEAELGDDRGNGNDGGDGSDDEPDWMRDFVIDKEEKKKKKKNEEKCGSVWGKLHSKKKSKEISKDFRIMGVGEENGCGSLQKKIDAVEIKVVALGNSARINERCLELQKKKKNEPTKVKVRGVCILGYDLQLSYQVSSILNLKVGAGVRRTKASSGCPMLRKHKVQREFRNEVSQQGPLDIEDLANLGRTMGTCPYYGSRSMVRRADLVVLPYQSLLSKSSREALGLNLKSNIVIIDEAHNLADSLINMYDSKISLSQLETVHSHVERYFVRFRNLLGPANRRYIQTLMVLMQAFLRVLLDDKDGNLIDSCRDIDQVSEESRASDFTMAINDFLFELNIDNINLVKLSKYIKESNIMNKNANNASEFSVVIVSGYGEKLSTFEKMPTLHKMEEHAEEGSCVSAFQALAGILLSLTNNDGDGRIIISRSRSTSLRKQGGYMKYVMLSGEKIFSEIVDEAHAVVLVGGTLQPIEETRERLFPWLPPNQLHFFSCGHIVPPDSTMPIAVARGPTGRSFDFSFSSRSSPDMMRELGLLLCNLVTVVPEGIVVFFPSFDYENRVYEHWGSSGILERITKRKRVFREPRNNMDVESVLKEYKDTIDTLSVMNSEVNQASHSGAILLAVVGAKLSEGINLSDGMGRCIVMVGLPYASPSDIELLERIKHIEGFQKFNLPENPSISASYNLYSGDVQGGFDILRSCSHRGKEYYENLCMKAVNQSIGRAIRHINDYAAILLVDTRFASDSSKRSFSHPVTKLPQWIKDRLVSSTITYGEVHRLLHQFFKLKKHAAISPFSRSCKKSHYINL 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0189 882 Pfam DEAD_2 167 338 IPR010614 GO:0003677|GO:0003678|GO:0005524
Aed2g0189 882 PANTHER DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER 9 845 IPR045028 -
Aed2g0189 882 Gene3D - 14 81 IPR027417 -
Aed2g0189 882 Gene3D - 592 833 IPR027417 -
Aed2g0189 882 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-2 domain profile. 7 367 IPR014013 GO:0005524
Aed2g0189 882 PANTHER ATP-DEPENDENT DNA HELICASE DDX11-RELATED 9 845 IPR028331 -
Aed2g0189 882 Pfam Helicase C-terminal domain 614 829 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Aed2g0189 882 SMART deadxpd 9 361 IPR006554 GO:0003678|GO:0016818
Aed2g0189 882 Gene3D - 157 374 IPR027417 -
Aed2g0189 882 MobiDBLite consensus disorder prediction 83 104 - -
Aed2g0189 882 SMART Cxpdneu3 632 819 IPR006555 GO:0003676|GO:0004386|GO:0005524|GO:0006139|GO:0016818
Aed2g0189 882 TIGRFAM rad3: DNA repair helicase (rad3) 182 847 IPR013020 GO:0003678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0189 K11273 - gmx:106794132 1143.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0189 2 1253053 1257947 Aed2g0189 2 1253053 1257947 ECH