Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0160 ATGGGTTCCCAACAAACAGTTTGCGAGGTTCCTGTTGTGAACTTCACTGATGAGGAGTTGAAACCTGGTACAGCAAAGTGGGCTTCAGCATGTAAAGTGATTCGGAGTGCACTTGAGGATCATGGTTGTTTTTTTGCGTTTTTTGATAAAGTTCCTATGGAGCTTTACAACTCAGTTTTTACTCTAATGGAAGAACTATTTGATCTTCCATTGGAAACAAAAACGCAAAAGTTGAGTGATAAGCCCTATCATAGTTATTATGGACAATTTGCTCACCTCCCTCTATATGAATCCCTAGGGATCAATGATCCCTTGACCGTTGAAGGAATTCAAACCTTCACCAAACTAATGTGGCCAGCGGGATATCATCATTTCTGTGAGAGTCTCGGTCTCTATGCAAAGCTGGTGGTAGAATTGGATCATATGACTAAAAGAATGGTGTTTGATGGTTATGGTTTGGAGCAAAGGCACTGTGATTCCCTTCTCGAATCAACCAACTACATGCTCCGTAGCTTCAAATATAGACAGCCGAAGAAGGATGAAAACAATTTGGGATTACATGCTCACACGGACACCTCTTTCTTCACCATTTTGCATCAGAATGATGTAAATGGTTTGCAAGTCAAATTGAAAAATGGAGAGTGGATTGATATTCATCTCTCACCCTTCATGTTTCTCATCCTGGCAGGCGATGCATTTAAGGTTTGGAGCAACGATCGGATACAGTGTTGTGAACACCGAGTGATTATAAATGCGAAGAAGGAAAGGTACTCCATGGGACTGTTTTCACTTGGCGGCAAGATGGTTGAAACACCAGAAGAGCTGGTTGATGAAGAACATCCAAGACGTTATAAGCCATTTGATCATTATGAATACCTACGTTTCTATTCAACAAACAAGGCCTTAGAATCCAAGTGTCGAATCAATGCATTCTGCGGCATAGACTATGCTGATGAAAACTGA 963 0.4112 MGSQQTVCEVPVVNFTDEELKPGTAKWASACKVIRSALEDHGCFFAFFDKVPMELYNSVFTLMEELFDLPLETKTQKLSDKPYHSYYGQFAHLPLYESLGINDPLTVEGIQTFTKLMWPAGYHHFCESLGLYAKLVVELDHMTKRMVFDGYGLEQRHCDSLLESTNYMLRSFKYRQPKKDENNLGLHAHTDTSFFTILHQNDVNGLQVKLKNGEWIDIHLSPFMFLILAGDAFKVWSNDRIQCCEHRVIINAKKERYSMGLFSLGGKMVETPEELVDEEHPRRYKPFDHYEYLRFYSTNKALESKCRINAFCGIDYADEN 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0160 320 Gene3D - 2 302 IPR027443 -
Aed2g0160 320 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 164 266 IPR005123 -
Aed2g0160 320 Pfam 2OG-Fe(II) oxygenase superfamily 171 262 IPR044861 -
Aed2g0160 320 SUPERFAMILY Clavaminate synthase-like 6 299 - -
Aed2g0160 320 PANTHER 2-OXOGLUTARATE-DEPENDENT DIOXYGENASE 5 313 - -
Aed2g0160 320 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 313 - -
Aed2g0160 320 Pfam non-haem dioxygenase in morphine synthesis N-terminal 10 90 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0160 Aed-Chr2 1076424 1077853 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0160 132 311 Glycosyltransferase AT5G59530 26.984 1.67e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0160 - - gmx:100794707 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0160 2 1076424 1077853 Aed2g0160 2 1076424 1077853 ECH