Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Aed2g0150 | ATGCGAACTGCGAACACCACTTCGATGATGGGATCCGGGTCGGGTTCTCTTCTGTGGTTCCGAAAGGGACTTCGGATCCACGACAACCCCGCTCTCGAATTCGCTTCACGTGGGGACTCCGCCTCTCATCTCTACCCCGTCTTCGTGATCGACCCGCATTACATGAAACCCGACCCGAATGCTTCCACGCCCGGGTCATCGCGCGCGGCTCTGAACCGCATCAAGTTCTTGCTGGAGAGCCTCGTTGACCTTGACCTCAACCTCAAGAGCCTTGGCTCGCGACTTTTGATTCTCAAGGGTGACCCTGCCGAAGTTGTTATTCGATGCTTGAGGGAGTGGAATGTTAAGAAGCTATGCTTTGAGTTCGACACTGAACCGTATTATCAGGCTCTGGATGTTAAAGTTAAGAACTTTGCACTTGCTGCCGGAATTGAGGTTTTCTCCCCTAATGGAGGCAAGCCTCCCCTTAGTTATCAATCATTTGTCAAGCTTGCTGGGCACCCGCCATCTCCTCTCTCAACTGGGTACTCTTCACTTCCTCCAGTTGGCCATCTTGGAAGTTGTGATATTTCTGAAGTTCCTACAATCAGAGATCTTGGATATGAAGATGCTGAGCAGGATGAGTTCTCTCCTTTCAAAGGTGGTGAGTCAGAAGCATTGAAGAGGTTGGATGAATGCATGGAAGACAAGGAGTGGGTGGCAAACTTTGAGAAACCAAAGGGCAATCCATCTTCATTTCTTAAGCCAGCAACAACTGTTTTATCACCTTATCTGAAATTTGGTTGTCTTTCTTCCAGATATTTCTACCAACGCATTCAAGATGTATATAAAAGTATGCCAAAGCATACATCCCCGCCTGTTTCTCTTATAGGACAGTTGTTGTGGCGAGACTTCTTTTACACAGCAGCTTTTGGGACTCCAAATTTTGATAGGATGAAAGGCAATAGGATATGCAAGCAGGTTCCTTGGAAGGATGATGATAAACTGTTGGAGGCTTGGAGGGAGGCTAGGACAGGATTTCCTTGGATTGATGCTATCATGATACAGCTACGCAAATGGGGTTGGATGCATCATTTGGCACGACATTCTGTTGCATGTTTTCTAACTCGAGGCGATCTGTTTGTTCATTGGGAAAAAGGACGAGACATCTTTGAGAGGCTTCTGATTGATTCAGATTGGGCAATTAATAATGGAAACTGGATGTGGCTTTCTTGTTCATCTTTCTTTTATCAGTATAATCGTATTTATTCCCCAACTACATTTGGTAAGAAGTATGACCCTAACGGCGAATATATTAGGTATTTTCTCCCAGTCCTAAAAGTAGATATGCCCAGGGAGTACATTTATGAACCCTGGAAGGCTCCTAAAAGCATTCAGACCAAAGCAAAATGCATAATTGGCAAAGACTACCCAATGCCAGTTGTTTCTCATGATTCTGCGAGTAAAGAGTGCCGAAGGAAAATGGGCGAGGCATATGCATTGAATAAAGAATTGAATGGTTTGGTTAGTGAAGATGATCTGAAAAACTTGAGGAGGAAATTAGATGAGAGTGAAGGGCAAGAGGCTGGAGCTAAAAGATATAAGCAACAGCTAATTGGCTGA | 1602 | 0.4501 | MRTANTTSMMGSGSGSLLWFRKGLRIHDNPALEFASRGDSASHLYPVFVIDPHYMKPDPNASTPGSSRAALNRIKFLLESLVDLDLNLKSLGSRLLILKGDPAEVVIRCLREWNVKKLCFEFDTEPYYQALDVKVKNFALAAGIEVFSPNGGKPPLSYQSFVKLAGHPPSPLSTGYSSLPPVGHLGSCDISEVPTIRDLGYEDAEQDEFSPFKGGESEALKRLDECMEDKEWVANFEKPKGNPSSFLKPATTVLSPYLKFGCLSSRYFYQRIQDVYKSMPKHTSPPVSLIGQLLWRDFFYTAAFGTPNFDRMKGNRICKQVPWKDDDKLLEAWREARTGFPWIDAIMIQLRKWGWMHHLARHSVACFLTRGDLFVHWEKGRDIFERLLIDSDWAINNGNWMWLSCSSFFYQYNRIYSPTTFGKKYDPNGEYIRYFLPVLKVDMPREYIYEPWKAPKSIQTKAKCIIGKDYPMPVVSHDSASKECRRKMGEAYALNKELNGLVSEDDLKNLRRKLDESEGQEAGAKRYKQQLIG | 533 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Aed2g0150 | 533 | Pfam | DNA photolyase | 16 | 150 | IPR006050 | - | |
| Aed2g0150 | 533 | Gene3D | HUPs | 12 | 146 | IPR014729 | - | |
| Aed2g0150 | 533 | SUPERFAMILY | Cryptochrome/photolyase, N-terminal domain | 16 | 216 | IPR036155 | - | |
| Aed2g0150 | 533 | Gene3D | DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3 | 307 | 532 | - | - | |
| Aed2g0150 | 533 | PANTHER | CRYPTOCHROME | 16 | 499 | IPR002081 | - | |
| Aed2g0150 | 533 | SUPERFAMILY | Cryptochrome/photolyase FAD-binding domain | 201 | 494 | IPR036134 | - | |
| Aed2g0150 | 533 | MobiDBLite | consensus disorder prediction | 514 | 533 | - | - | |
| Aed2g0150 | 533 | Pfam | FAD binding domain of DNA photolyase | 290 | 488 | IPR005101 | - | |
| Aed2g0150 | 533 | Gene3D | - | 147 | 305 | - | - | |
| Aed2g0150 | 533 | PANTHER | (6-4)-PHOTOLYASE, ISOFORM A | 16 | 499 | - | - | |
| Aed2g0150 | 533 | ProSiteProfiles | Photolyase/cryptochrome alpha/beta domain profile. | 14 | 154 | IPR006050 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Aed2g0150 | Aed-Chr2 | 1022223 | 1029672 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Aed2g0150 | K02295 | - | gmx:100780347 | 1007.28 |
Event-related genes