Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0140 ATGGAGGCCCTGCACTTGCACCGCGTGGGTGTTCCTAAAAACTCGATCTTTCTTCGCACCAGTGGCACCCCATTATCCACAATTGGCATTGCAAGGCCACCACTGCGTTGGTCCTCTCAAACTTGCAGTGCCAGAGCAGGGTGGTTTTTGGGTCTTGGAGGAGACAACAAGATGAAGAGCAATTTAGCTGAGACCGTGAAAGCCGGTGACCCTGTTCTGCACGAGCCTGCTCAGGAAGTTGACCCTAATGAGATAAAGTCAGAGAGAGTGCAGAAGATCATTGATGACATGATCCGGGTCATGAGAAAGGCTCCTGGTGTTGGTCTAGCTGCTCCCCAGATTGGAATTCCTTTCAGGATAATTGTTTTGGAAGATACCAAAGAGTATGTTAGTTATGTCTCCAAGGAAGAGGCTCAACTTCAAGATAGAAGACCTTTTGACCTTTTGGTGATCCTGAATCCCAAGCTAGAGAAGAAGGGCAAGAGGACTGCTCTCTTTTTTGAAGGCTGCTTGAGTGTTGACGGGTTTAGAGCAGTGGTGGAGCGACACCTTGACGTTGAAGTTACAGGTTTGGATCGCTATGGTGCGCCAATCAAAATAAATGCTTCGGGATGGCAGGCTCGGATTTTACAACATGAATGTGATCACTTGGATGGAACTCTGTATGTTGATAAGATGCTACCTAGGACTTTCAGAACTGTGGATAACATGGACCTGCCTCTTGCCCAGGGGTGCCCCAAGCTTGGTCCTCTCTCATAA 759 0.4822 MEALHLHRVGVPKNSIFLRTSGTPLSTIGIARPPLRWSSQTCSARAGWFLGLGGDNKMKSNLAETVKAGDPVLHEPAQEVDPNEIKSERVQKIIDDMIRVMRKAPGVGLAAPQIGIPFRIIVLEDTKEYVSYVSKEEAQLQDRRPFDLLVILNPKLEKKGKRTALFFEGCLSVDGFRAVVERHLDVEVTGLDRYGAPIKINASGWQARILQHECDHLDGTLYVDKMLPRTFRTVDNMDLPLAQGCPKLGPLS 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0140 252 CDD Pep_deformylase 66 222 IPR023635 GO:0042586
Aed2g0140 252 TIGRFAM pept_deformyl: peptide deformylase 64 228 IPR023635 GO:0042586
Aed2g0140 252 SUPERFAMILY Peptide deformylase 64 233 IPR036821 -
Aed2g0140 252 PANTHER PEPTIDE DEFORMYLASE 38 250 IPR023635 GO:0042586
Aed2g0140 252 Gene3D Peptide deformylase 61 250 IPR036821 -
Aed2g0140 252 PANTHER PEPTIDE DEFORMYLASE 38 250 - -
Aed2g0140 252 Hamap Peptide deformylase [def]. 61 237 IPR023635 GO:0042586
Aed2g0140 252 Pfam Polypeptide deformylase 65 228 IPR023635 GO:0042586
Aed2g0140 252 PRINTS Peptide deformylase signature 180 198 IPR023635 GO:0042586
Aed2g0140 252 PRINTS Peptide deformylase signature 95 124 IPR023635 GO:0042586
Aed2g0140 252 PRINTS Peptide deformylase signature 199 228 IPR023635 GO:0042586
Aed2g0140 252 PRINTS Peptide deformylase signature 168 179 IPR023635 GO:0042586
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0140 Aed-Chr2 971281 973162 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0140 K01462 - gmx:100784292 452.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0140 2 971281 973162 Aed2g0140 2 971281 973162 ECH
Aed1g1492 1 13493839 13495242 Aed2g0140 2 971281 973162 PCT