Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0113 ATGAATGAGGTGGAAGTCTTGATATCTTTCCTGGTTACTCGTGCTATCATGGAGTTTGATGCTCGTGCTACCCCTGATAATCATAATGAGATATCTGATTCAGGAACACAACCCACTACGCGGATGAGAAAGAAGTCTATGGTGTGGGACTATTTCACAGTGGAAACTGTTGGAGCTGGATGTACCAGGGCCTATTGTAAACAATGCAAAAAATCATTTTCTTATATAACTGATTCAAAATTAGCTGGCACAAGCCATCTGAAAAGACACATTTCTTTGGGAATCTGTCGAGTACTTCGGGAGAAAAAACAACAAACAACATATCCCAAAACTGGTGGTTCTCTAGATACTGCCAATCCACCCAAGAAACGGCCAAGAGCAGCACCAGGGTTTGCCGGTAATGGTATCTTATTTGATCAGGAGTGTTGCAACCATGATGTTGGTCGGCTGTTTACCCTTGCGCTTGATAAATCCTTTTCCAGTGAGGCTGTGCTGGGAAATCTGAGAGACCTTCTCTTTGTTAAGAACCCTGCCATCCTCAATGGTCAGTTGTTAAACCAGAATTGTTATGCTCATGTTCTTAGTCATCTTGCAGCTGATGCACTATGGGCAATGAGAGAGACTATTAGCAAAGTTCGGGAAAGTGTAAAGCATGTGAAATCTTCTGAATCCCATAAACGGAAGTTTATTGAGCTGAAGCAACATCTACAAGTACCTAGTAAGATGGACCTTTCAATTGATGACCAGTGTAAATGGGACACAACATATCATATGCTTGTAGCTGCCTGTGAATTAAAGGAAGTCTTCACTTGCCTTGATACCATCGATCCTGATTACAGAATGAGTCTAACACTGGGTGACTGGAAGCAGGTTGATACCCTGTGCTCATATTTGAAGTATTTGTATGATGCAGCTAAAATTGTGACTGTGCAACCATACCCGACTTCAAACTTATTTTTTGCTGAAGCGTCAAAAGTTCAGGTGGAGTTGACACATGCGGCCTTCAGCCAGGATCCTTTCCTTAGCAGTTTGATTATGCCTCTGCACAAGAACTTTGATCAATATTGGAGAGAAAGCTGCCTCATCTTGGCAATTGCTGTAGCTATGGACCCTAGGCATAAAATGAAACTTGTCGAATTCACCTTTGCTAAGGTATTTGGTGAGAATGCTGAGGCATGGATAAAAATAGTTGAGGATGGTCTTCGTGAACTTTTTATTGAATACAGCACCCAAATGTTTCTTACAGCAACAAATGGGGATGAAGATTGTCGAGTGAGAAATAATGTGTTGCCGGGTGAGAAAACTGACAGGGTTGTCGGTGCCGGGGAGAAGCGGTGTGGAAGACACCATGAAGAGCAACTTTGA 1365 0.4242 MNEVEVLISFLVTRAIMEFDARATPDNHNEISDSGTQPTTRMRKKSMVWDYFTVETVGAGCTRAYCKQCKKSFSYITDSKLAGTSHLKRHISLGICRVLREKKQQTTYPKTGGSLDTANPPKKRPRAAPGFAGNGILFDQECCNHDVGRLFTLALDKSFSSEAVLGNLRDLLFVKNPAILNGQLLNQNCYAHVLSHLAADALWAMRETISKVRESVKHVKSSESHKRKFIELKQHLQVPSKMDLSIDDQCKWDTTYHMLVAACELKEVFTCLDTIDPDYRMSLTLGDWKQVDTLCSYLKYLYDAAKIVTVQPYPTSNLFFAEASKVQVELTHAAFSQDPFLSSLIMPLHKNFDQYWRESCLILAIAVAMDPRHKMKLVEFTFAKVFGENAEAWIKIVEDGLRELFIEYSTQMFLTATNGDEDCRVRNNVLPGEKTDRVVGAGEKRCGRHHEEQL 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0113 454 Pfam Domain of unknown function (DUF4413) 311 408 IPR025525 GO:0003677
Aed2g0113 454 PANTHER BED FINGER-RELATED 32 149 IPR045259 -
Aed2g0113 454 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 32 149 - -
Aed2g0113 454 PANTHER BED FINGER-RELATED 148 418 IPR045259 -
Aed2g0113 454 MobiDBLite consensus disorder prediction 105 125 - -
Aed2g0113 454 PANTHER ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE ISOFORM X1 148 418 - -
Aed2g0113 454 SUPERFAMILY beta-beta-alpha zinc fingers 46 97 IPR036236 -
Aed2g0113 454 ProSiteProfiles Zinc finger BED-type profile. 43 103 IPR003656 GO:0003677
Aed2g0113 454 SMART bed5 43 99 - -
Aed2g0113 454 SUPERFAMILY Ribonuclease H-like 185 432 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0113 Aed-Chr2 829654 832638 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0113 - - gmx:106799409 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0113 2 829654 832638 Aed2g0113 2 829654 832638 ECH
Aed1g1523 1 13645732 13647705 Aed2g0113 2 829654 832638 PCT