Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0092 ATGTCAGAAGCATTACAGTTACCTGAGGAGTGCTGGGAATTAGTATTGAAGAAATGTGATGGTGTGTTTGAAATGGAAGCAGTGTCCCTTTGTTCGACCCAATTCCTCTCCATCACCAACCGCCTCCGAACCTCTTTCTCCATATGCGACCCAGCGCTCCCTTTTCTCCCTCGCCTCTTCCTCAGGTTCCCTTCCCTCACCTCCCTCGACCTCACGCGCCTCCACCACCAGCACCTCCACGCGCTCCTCCTCCTTATCTCACGCTCCTCATTACCCCTCCAATCTCTCGACCTCTCCTCCCACCCCACCCTTCCTTCATCTGGCCTCCGAGTTTTGGCCGAAAAGGTCAAATCTTTAAAATCTCTGACCTGTTCCCACATGGGTTCTCTCAAAAACTCCGATCTCCTCCTCATCGCCGACTCTTTCCCTTTCCTCGAACATCTCGACCTTAGTTTCCCCGAAGACACCGACGATTCCACCGACCCCGTCTCCGATGTCGGTGTAAAGGCTCTCTCTTTGGCCCTTTCCAAGCTCCGCAGCGTTGACCTTTCCGGCAATTTCTTCATCAACGACCCTTCCATTCTCAGTCTCTGCAAAAACTGCGAATTTCTCGAGGAAGTTACGATCTTCGAGTGTCACTTCATCACGCAACGTGGCATCGCTTCCGCCATCAGGGAGAGACTTTCTTTGCGTTCTTTCCGCGTCAGCAACTTCGGGTGTGGTACCAAAAAAGGGGACTTTTTGAGACCCTGCGTGACTCTTGATTTCATTGCCGCGATGGTGAGTTTGAAGGGCTTGACTTTCCTCGATATGTCCTGTTCCTGTATCTCCGACGAGTTGCTATGTTGTGTTGCGGAGGAAGGGATTCCTCTCAAGAAGCTTTTTTTAGAAGGTTGTTGTAACTATAGTTTTTTTGGAGTGTTGTGCTTGTTGTCCAAGTGTCAGTCCATGGAGCATTTGGATCTTCAAAACGCTGAGTTTCTGAGTGATCAGCGTGTGGAAGAGTTGTGTGAGTTTCTTGGGAATTTGGTGTCTATAAATGTTAGTGGTTGTAGGCTGTTAACTGATTTAGCTTTGTTTGCACTCGTTAGGAAGTGTCCTTTATTGAATGAGATCAGAATGGAGGGAACGGATGTTGGGAAAAGGAGAGTTGAAGATGATTTGGTGAATGGTGTTGTGAATTGTCAAGTGAAGTCTCTCTACTTGGGAAACAATTCCATGTTGAGGGATGAAAGTGTTCAAGTGTTTGCTTCTGTTTGCCCCAGTTTGGAGGTGCTTGATTTAAGCTCTTGTTGTGGCATATCTGAAGGTGTTGTTGAGATTTTAAGGAGGTGTAATGTGATTAGGCAATTGAGCTTGGCCTTTTGTTCAGGAGTGAAGCTAGCTGGGTTAAACTTTGAAGTTCCAAAACTTGAGGAGTTGGACTTGTCATGCTCAGTGGTTGATGATGAAATGCTTTCTGTGATCTCAAAGTGTTGCCGGGGACTGCTGCATTTGGACTTGGAAAATTGCTCTCATGTCACGGCTGATGGAGTGAGGCAAGTGGTGGAGAAGTGCACCCGATTGCGAGGGATTAATTTGAAGTCTTGTGATGAAGTGGGGGCTAGTGTTGTTGCTTGGATGGTAGTTTCAAGGCCATCCTTGAGAAGGATAATGGCTCCCCTTAGTTTTGATCTAAGTGGTGTCCTGCATGACTTCCTCAATCGTCATGGATGCCTTGTTTGCTAG 1728 0.4757 MSEALQLPEECWELVLKKCDGVFEMEAVSLCSTQFLSITNRLRTSFSICDPALPFLPRLFLRFPSLTSLDLTRLHHQHLHALLLLISRSSLPLQSLDLSSHPTLPSSGLRVLAEKVKSLKSLTCSHMGSLKNSDLLLIADSFPFLEHLDLSFPEDTDDSTDPVSDVGVKALSLALSKLRSVDLSGNFFINDPSILSLCKNCEFLEEVTIFECHFITQRGIASAIRERLSLRSFRVSNFGCGTKKGDFLRPCVTLDFIAAMVSLKGLTFLDMSCSCISDELLCCVAEEGIPLKKLFLEGCCNYSFFGVLCLLSKCQSMEHLDLQNAEFLSDQRVEELCEFLGNLVSINVSGCRLLTDLALFALVRKCPLLNEIRMEGTDVGKRRVEDDLVNGVVNCQVKSLYLGNNSMLRDESVQVFASVCPSLEVLDLSSCCGISEGVVEILRRCNVIRQLSLAFCSGVKLAGLNFEVPKLEELDLSCSVVDDEMLSVISKCCRGLLHLDLENCSHVTADGVRQVVEKCTRLRGINLKSCDEVGASVVAWMVVSRPSLRRIMAPLSFDLSGVLHDFLNRHGCLVC 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0092 575 Gene3D Ribonuclease Inhibitor 11 371 IPR032675 -
Aed2g0092 575 Gene3D Ribonuclease Inhibitor 379 463 IPR032675 -
Aed2g0092 575 SUPERFAMILY RNI-like 177 378 - -
Aed2g0092 575 Gene3D Ribonuclease Inhibitor 464 553 IPR032675 -
Aed2g0092 575 SMART LRR_CC_2 90 115 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 63 88 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 420 444 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 468 492 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 314 339 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 519 544 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 201 226 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 175 200 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 288 313 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 340 365 IPR006553 -
Aed2g0092 575 SMART LRR_CC_2 493 518 IPR006553 -
Aed2g0092 575 SUPERFAMILY RNI-like 45 237 - -
Aed2g0092 575 SUPERFAMILY RNI-like 311 551 - -
Aed2g0092 575 PANTHER F-BOX AND LEUCINE-RICH REPEAT PROTEIN 17 20 563 - -
Aed2g0092 575 Pfam Leucine Rich repeat 420 434 IPR001611 GO:0005515
Aed2g0092 575 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 20 563 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0092 Aed-Chr2 638448 640175 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0092 K10268 - gmx:100819538 875.93