Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0082 ATGGAAGTGCCGAGTTCCTGGGATGCCCTTCGCAAACAGAGTGATATAGAGTCTTGGATTGAGCGTTTACTAAAACAACTCCAACAAGTAAACGCACAGATGCAAGCTTGGGTATCATCTGGTGGTTCAGAAATGGTTTCTCATACTTTGACTAGACACCAAGAAATTCTTCAAGATCTCACCCAGGAATTTTACCGTCTCCGCTCAAGTCTTAAAGCTAAGCAAGAACATGCTTCACTGCTAGACGATTTTAAAGAATTTGATCGAACAAGGTTAGATTTGGAACAAGGTGTAGAGTCTGAACAGCATGCACTCCTAAAAGAGCACACATCTATCAGCCGAAATACAGGACATATGGACAATGTTATTTCACAAGCACAAGCAACACTAGGAGCACTTGTCTTCCAACGTTCAACATTTGGCGGTATCAATTCAAAGCTCGGCAATGTGAGCAGTCGCCTCCCAACGGTAAATAACATACTTTCAGCAATAAAGAGAAAAAAGTCAATGGACACCATTATACTTTCCCTTGTTGCAGCCGTATGCACATTTCTCATTTTCATCTACTGGCTATCCAAGTGA 582 0.4175 MEVPSSWDALRKQSDIESWIERLLKQLQQVNAQMQAWVSSGGSEMVSHTLTRHQEILQDLTQEFYRLRSSLKAKQEHASLLDDFKEFDRTRLDLEQGVESEQHALLKEHTSISRNTGHMDNVISQAQATLGALVFQRSTFGGINSKLGNVSSRLPTVNNILSAIKRKKSMDTIILSLVAAVCTFLIFIYWLSK 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0082 193 PANTHER GOLGI SNAP RECEPTOR COMPLEX MEMBER 1 13 193 - -
Aed2g0082 193 Coils Coil 20 40 - -
Aed2g0082 193 PIRSF Golgi_SNARE 2 192 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
Aed2g0082 193 Pfam Snare region anchored in the vesicle membrane C-terminus 104 168 - -
Aed2g0082 193 PANTHER GOS-28 SNARE- RELATED 13 193 IPR023601 GO:0000139|GO:0005801|GO:0006888|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0082 Aed-Chr2 588360 592123 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0082 K08495 - gmx:100797885 344.354