Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0080 ATGGACTACAGCTCTGAAGAAGATTCTGAAATCAGTGACTCTGAGCTTGAAGAGTATTCAGAGAAACCATATGAAGAGTTAAGGGCCGGGAAATACAAGGTTAAAAATTTGAATGGAACTCTTAGATGTCCTTACTGTGCTGGGAAGAAAAAACAAGAATTCAAATATAAGGATTTATTGCAACATGCATCAGGAGTTGGTAAGGGTTCTGCTAACAGAAGTGCAAAACAAAAAGCAAACCACCTTGCTCTAGCAAAGTATTTAGAGACTGACCTAGCTAGTGAAGCAGAGCCAATCCAGCGTCCAGCTCTACCCCAACCTGTCAATCAACCTTTACCTCAAGAAGATCTTTATGTTTGGCCGTGGACAGGTATAATTGTTAACATAAAGGAAAAATCAATCGATTCTGGATATTGGTTGAAGGAATTTGCTAAATTCAGACCAATAGATTTCCATATATTCTTGAAAGGTAATGACCAGATTGCTGAGGCTGTGATAGACTTCAACAACGACTGGAATGGTTTCATGAATGCAAGTGAATTTGAGAAGTCATTTGAAGCTGCACGTTATGGTAAGAAGGATTGGAATTCAAGGAAGTTAGAAGCTGGCTCAAACATTTATGGATGGGTTGCGCGGGAAGATGATTATAATTGTGGAGGGCCAATCGGGGAATACCTCCGCAACAAAGGAAGGTTGAGGACAGTTTCAGATATTGTTCAAGAGGCATCTGAAAGCAGGAATAGTATTGTGACAAACTTGACTAATGAAATTGAGATTACAAACGAAAACCTTGACAAAATGCAATATAAGTTTAATGAAAAGACTATGTCCTTGAGTAGGATGCTTGAGGAGAAAGATAAGCTTCACAATGCCTTTGAAGAAGAATCAAGGAGTATGCAGCGGAGAGCTCGTAATGAGGTACGGAGGATCTTGGATGAACAAGAAAAATTGAGTAGTGAATTGGAGGAAAAAAAGCGGAAGCTTGATTCCTGGAGTAGAGATCTAAACAAACGTGAGGTACTAACTGATCAAGAGAAGAAGAAACTTGAAGAGGACAAGAAGAAGAAAGATTTGAGGAATGAGTCACTCCAATTGGCTTCAAAGGAACAAAAGATAGCTGATGAGAATGTCTTAAGGCTTGTTGAAGAGCAAAAGCGAGAGAAAGAGGAGGCCTATAACAAGATTCTTCAGTTGGAAAAACAGTTAGATGCTAAACAAAAATTGGAAATGGAAATTGAAGAGTTAAAAGGGAAATTGCTAGTTATGAAGCATCTTGGAGATGAAGATGATGCAGCTGTTCAGGATAAAATAAAAGAGATGAATGATGAATTGCAAGAAAAAGTAGATAATTTGGAAAATATGGAGGCCATGAATCAAACCCTCATTGTGAAGGAGCGCCAGAGTAACGATGAACTGCAGGAAGCTCGTAAAGAATTAATTAAACTCAATATTTGTGGTGTTGATTAA 1467 0.3838 MDYSSEEDSEISDSELEEYSEKPYEELRAGKYKVKNLNGTLRCPYCAGKKKQEFKYKDLLQHASGVGKGSANRSAKQKANHLALAKYLETDLASEAEPIQRPALPQPVNQPLPQEDLYVWPWTGIIVNIKEKSIDSGYWLKEFAKFRPIDFHIFLKGNDQIAEAVIDFNNDWNGFMNASEFEKSFEAARYGKKDWNSRKLEAGSNIYGWVAREDDYNCGGPIGEYLRNKGRLRTVSDIVQEASESRNSIVTNLTNEIEITNENLDKMQYKFNEKTMSLSRMLEEKDKLHNAFEEESRSMQRRARNEVRRILDEQEKLSSELEEKKRKLDSWSRDLNKREVLTDQEKKKLEEDKKKKDLRNESLQLASKEQKIADENVLRLVEEQKREKEEAYNKILQLEKQLDAKQKLEMEIEELKGKLLVMKHLGDEDDAAVQDKIKEMNDELQEKVDNLENMEAMNQTLIVKERQSNDELQEARKELIKLNICGVD 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0080 488 Coils Coil 250 270 - -
Aed2g0080 488 MobiDBLite consensus disorder prediction 1 15 - -
Aed2g0080 488 Coils Coil 300 334 - -
Aed2g0080 488 Pfam XS zinc finger domain 43 85 IPR005381 GO:0031047
Aed2g0080 488 Coils Coil 378 425 - -
Aed2g0080 488 PANTHER RIBONUCLEASE P SUBUNIT P38 4 481 IPR045177 GO:0080188
Aed2g0080 488 Coils Coil 434 482 - -
Aed2g0080 488 Coils Coil 341 366 - -
Aed2g0080 488 PANTHER FACTOR OF DNA METHYLATION 1-RELATED 4 481 - -
Aed2g0080 488 Gene3D XS domain 112 272 IPR038588 -
Aed2g0080 488 MobiDBLite consensus disorder prediction 1 22 - -
Aed2g0080 488 Pfam XS domain 115 217 IPR005380 GO:0031047
Aed2g0080 488 CDD RRM_like_XS 118 216 IPR005380 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0080 Aed-Chr2 578984 584016 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0080 - - gmx:100790829 873.618