Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0024 ATGGAGAGAGGCATAATAATAAGCATTGAGTGTGTGGCGTTGTTGATATGGTCAAGCACATTGTTGGCGTGCGCTATTCAACAACAACAGCAGCTGAAGATCGTGGTGAACGCGAGCCAGTTACCGTTGGAAGACTACTACGACTACATCATAGTGGGTGGCGGAACTGCTGGCTGCCCACTGGCGGCGACACTGTCTCGGTCCTTTAGGGTGCTTTTGCTGGAACGCGGAGGCGCTGGGCACGGCAACCCCAACTTGATGAACCAAGAAGGGTTCTTGGCCAACCTCTTCAACACAGATACCGGAGATTACTCTCCCGCCCAAGGCTTCGTTTCCGATGAGGGAGTCCCGAACGCCCGTGGCCGCGTTCTTGGAGGCAGCAGCGCAATCAACGCAGGCTTCTACAGCCGAGCAGACGGTGATTTCTTCGCCAGGTCCCGCTTGCCCTGGAACCTATCCCTCGTCAACCAATCCTACCAATGGGTGGAGAAACAGATCGTCTTCAGACCCAATCTCAAGACCTGGCAATCAGCGGTTCGCGATGGCTTGCTTGAAACAGGGGTTACTCCCTACAACGGTTACACTCTGGAGCACGCCAAGGGAACCAAGATTGGGGGGTCCACCTTCGACAGCGCCGGCAGAAGACACACCTCTGCTGATCTTTTGAGACATGCACGCGCTTCCAACATCAATGTCGCCGTTTACGCCTACGTGGAGAGGGTGCTTCTGGCGGGTTCGAGGGCAGTTGGAGTCCTCTACAGAGACGAACTGCAAACAAGGGGGAGGTACCACCGAGCATTATTGCGGGAACATGGAGAGGTGATTCTGTCAGCGGGTGCGATCGGAAGCCCTCAGCTTCTTCTTCTTAGCGGGATCGGTCCCAGGCCATATCTGTCTTCGTTGGGGATACCCGTTGCACACCACCTTCCCTACGTGGGGCACTTCCTCTATGATAATCCAAGGAACGGAATTACGATACTGCCCTCGCTTCCACTGGAGCATTCTCTGATCCAAGTAGTGGGGATTACCGAGTCCGGCGCATACATTGAGGCGGCTTCGAACGTGGTTCCTTTCAGGTTCCCTCCTCACACTGCCTTCGTCCTCCGCTCGGGGCCTCTCTACCTGACTGTGGCTACACTGATATCGAAGATATCGGGGCCACTATCGAGCGGGTTTCTGAGACTTGGTTCGACGGATGTGAAGGAGAATCCCGTAGTGAGATTCAATTACTTCAACAGCCCTGTTGACGTGGAGAGGTGCGTGAACGGAACGAGGAAGATAGGGGAGATACTGAGGAGCAAGGCAATGAAGGATTTAATGTTCAGCAACTGGTTTGGGGAGCGAGACTTCAGATTCATTGGCCCCGCTCTCCCAATTCACCAGACCGACTTCCCTCGCATGGCGGATTTCTGCCGCCGTACAGTCAGCACCATATGGCACTACCATGGAGGCTGCGTTGTTGGCAGGGTCGTTGATCCAAATCTCAACCTCATTGGAATTTCTTCCCTTCGTATTGTCGATGGATCCGTCTTTAGCGTTTCGCCCGGAACCAATCCTCAGGCCACCCTAATGATGCTAGGAAGGTATTTTGGCCTCAAGATAATCACTGAAAGGATGGGGTCGAATGTAGATCAGTAA 1638 0.5397 MERGIIISIECVALLIWSSTLLACAIQQQQQLKIVVNASQLPLEDYYDYIIVGGGTAGCPLAATLSRSFRVLLLERGGAGHGNPNLMNQEGFLANLFNTDTGDYSPAQGFVSDEGVPNARGRVLGGSSAINAGFYSRADGDFFARSRLPWNLSLVNQSYQWVEKQIVFRPNLKTWQSAVRDGLLETGVTPYNGYTLEHAKGTKIGGSTFDSAGRRHTSADLLRHARASNINVAVYAYVERVLLAGSRAVGVLYRDELQTRGRYHRALLREHGEVILSAGAIGSPQLLLLSGIGPRPYLSSLGIPVAHHLPYVGHFLYDNPRNGITILPSLPLEHSLIQVVGITESGAYIEAASNVVPFRFPPHTAFVLRSGPLYLTVATLISKISGPLSSGFLRLGSTDVKENPVVRFNYFNSPVDVERCVNGTRKIGEILRSKAMKDLMFSNWFGERDFRFIGPALPIHQTDFPRMADFCRRTVSTIWHYHGGCVVGRVVDPNLNLIGISSLRIVDGSVFSVSPGTNPQATLMMLGRYFGLKIITERMGSNVDQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0024 545 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Aed2g0024 545 SUPERFAMILY FAD/NAD(P)-binding domain 35 536 IPR036188 -
Aed2g0024 545 SUPERFAMILY FAD-linked reductases, C-terminal domain 316 484 - -
Aed2g0024 545 PIRSF Alcohol_oxidase 361 545 IPR012132 GO:0050660
Aed2g0024 545 PIRSF Alcohol_oxidase 22 353 IPR012132 GO:0050660
Aed2g0024 545 Gene3D - 168 477 - -
Aed2g0024 545 PANTHER OSJNBA0019K04.7 PROTEIN 31 541 - -
Aed2g0024 545 Gene3D - 47 527 IPR036188 -
Aed2g0024 545 PANTHER (R)-MANDELONITRILE LYASE-LIKE 31 541 - -
Aed2g0024 545 ProSitePatterns GMC oxidoreductases signature 2. 279 293 IPR000172 GO:0016614|GO:0050660
Aed2g0024 545 Pfam GMC oxidoreductase 387 528 IPR007867 GO:0016614
Aed2g0024 545 Pfam GMC oxidoreductase 47 319 IPR000172 GO:0016614|GO:0050660
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0024 Aed-Chr2 264766 266474 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0024 23 538 Miscellaneous Gene Families AT5G51950 44.385 6.66e-144 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0024 K08248 - gmx:100820069 912.524