Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0012 ATGTCGTCCTCCAAAGCCAAAACCCCTTCTTCACTCTCACTCTGCGCCTCCTCTAAGTCGCAACCGCATCCTCAGGCATGTAGCAATAACATGGCATTGGAATCCCAATCTCAGAAGCAGAAGAACAAGTATGGACGACACGGGGTGTTTGGAGACGTGTACAGCATCATCAAAGAGATGGAGATTGATCATCATCATAATAATAACTCCTCTACCTTTCACCTTCCCCCAATTCCAAATATTCTGGGCTCTAGAGAGGCTCGCGAGTTTATTAGCGGGGCCCTTTCAGGTGCGATGACAAAGGCTATACTTGCTCCTCTTGAGACCATCAGGACAAGAATGGTAGTGGGTGTTGGTTCCAAAAATATCACTGGTAGTTTCATAGAGGTTATAGAGCAGCAGGGATGGCAAGGACTCTGGGCTGGAAACATGATCAATATGCTTCGTATAGTTCCAACACAGGCCATTGAGCTTGGCACATTTGAGTGTGTCAAACGGGCAATGACATCCATGCAACAGCAACACAATCAAAATGAATACCCCAAGTTGCAGATAGGTTCCATCAATTTCAACTTATCTTTATCTTGGATTTCACCAGTTGCCATTGCCGGTGCAGCTGCAGGAATTGCTAGCACACTTGTATGCCATCCCCTTGAAGTTTTGAAGGACCGGTTAACTGTAAGTCCTGAAACTTACCCTAGTTTAGGCATTGCAATTAGAAATATTTATAAAGATGGTGGTGTTGGCGCTTTTTATGCTGGTATCTCACCAACTCTGGTTGGCATGCTTCCATACAGTACATGTTATTATTTCATGTATGATACTATAAAGGATTCTTACCGCCGGAGCAGAAATAAGAAATCTCTAAGCCGTACAGAGATGCTTCTACTTGGAGCTCTTGCAGGTTTCACTGCCAGTACAATTAGCTTCCCCTTGGAGGTAGCAAGGAAGCGGCTGATGGTGGGTGCTTTGCAAGGTAAGTGCCCGCCAAACATGGCAGCAGCACTTTCAGAAGTTATTAGAGAAGAAGGTCTGAAGGGTCTCTACAGAGGATGGGGTGCAAGCTGTTTGAAGGTCATGCCATCCTCTGGTATTACCATGATGTTTTATGAAGCGTGGAAAGACATATTGCTTCTCCAGAATGGTAATCCCCTTTAG 1158 0.4508 MSSSKAKTPSSLSLCASSKSQPHPQACSNNMALESQSQKQKNKYGRHGVFGDVYSIIKEMEIDHHHNNNSSTFHLPPIPNILGSREAREFISGALSGAMTKAILAPLETIRTRMVVGVGSKNITGSFIEVIEQQGWQGLWAGNMINMLRIVPTQAIELGTFECVKRAMTSMQQQHNQNEYPKLQIGSINFNLSLSWISPVAIAGAAAGIASTLVCHPLEVLKDRLTVSPETYPSLGIAIRNIYKDGGVGAFYAGISPTLVGMLPYSTCYYFMYDTIKDSYRRSRNKKSLSRTEMLLLGALAGFTASTISFPLEVARKRLMVGALQGKCPPNMAAALSEVIREEGLKGLYRGWGASCLKVMPSSGITMMFYEAWKDILLLQNGNPL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0012 385 PRINTS Mitochondrial carrier protein signature 298 320 IPR002067 GO:0055085
Aed2g0012 385 PRINTS Mitochondrial carrier protein signature 252 270 IPR002067 GO:0055085
Aed2g0012 385 PRINTS Mitochondrial carrier protein signature 142 162 IPR002067 GO:0055085
Aed2g0012 385 PRINTS Mitochondrial carrier protein signature 102 116 IPR002067 GO:0055085
Aed2g0012 385 PRINTS Mitochondrial carrier protein signature 89 102 IPR002067 GO:0055085
Aed2g0012 385 Pfam Mitochondrial carrier protein 292 378 IPR018108 -
Aed2g0012 385 Pfam Mitochondrial carrier protein 201 282 IPR018108 -
Aed2g0012 385 Pfam Mitochondrial carrier protein 87 169 IPR018108 -
Aed2g0012 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 289 376 IPR018108 -
Aed2g0012 385 MobiDBLite consensus disorder prediction 1 43 - -
Aed2g0012 385 Gene3D Mitochondrial carrier domain 83 380 IPR023395 -
Aed2g0012 385 PANTHER SOLUTE CARRIER FAMILY 25 48 381 - -
Aed2g0012 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 84 167 IPR018108 -
Aed2g0012 385 SUPERFAMILY Mitochondrial carrier 88 371 IPR023395 -
Aed2g0012 385 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 279 IPR018108 -
Aed2g0012 385 PANTHER MITOCHONDRIAL ADENINE NUCLEOTIDE TRANSPORTER BTL1-RELATED 48 381 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aed2g0012 Aed-Chr2 177376 180055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aed2g0012 74 385 Organic Solute Cotransporters AT3G20240 73.418 7.34e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0012 - - gmx:100777341 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aed2g0012 2 177376 180055 Aed2g0012 2 177376 180055 ECH