Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aed2g0010 ATGTGGACTACAAATATGCATGCAATGTCAGTCAGAAGCGGCGCTTTGTTTTGCTTTCAAATAAATTGCTGCGATTCAAAGCAAGGCCGTGGTTTTGGAGAAAACAGGATTAAGACCAACAAATCTGACAAGGGTTTAGTGTCTCAGGCTCCGCAAAGCAAGGGATCATCAACTAAACAGTCTCACCCTCTATCTTCTCAGGCACCGGCACCACGTTTAAGTTCACAAGTTGACGGCAAATCTAGGAACGACTTTTTCGATGTTGACTTTGAGGAACGGCTAAAAGCAGTTAGAAGGTCAGCACTTGAGCAGAAGAAGGCAGAGGATGTAAAAGAATTTGGAGCAATTGACTATGATGCACCCATTCCTTCCGACAATAAGACAATTGGCCTTGGTACTAAGATTGGAGTAGGGGTAGCCGTTGCAGTCTTCGGTCTGGTTTTTGCTTTTGGAGATTTTCTTCCATCAGGAAGTGTTAGTCCCACTGAAGACAGTGCTGTGGTCAATAGTAAGTTGTCTGAGGAGGATAAAGCTACTCTTCAGGAAAAACCAAATGATGTTGATGTTTTTCGTTTGCTTGGAGAAGTTAAGTACGAACTCAAAGATTATGAAGGGAGTGTTGCTGCATATAAAAGCTCAGCAAGGGTTTCCAAAGATATCCAATTTGAAGTTCTCCGTGGCCTTTCCAATTCATTACTTGCTTCCAAAAAGCCAGAGGAGGCTGTTCAATTACTTTTGGCCTATCGTGAGCGTCTGAGTTCAGAAAACTTGAGCAAAAAATCTGTTAGCAACCCAACAGACTTGCAGAAGCTGGATCCAGTCCAAGTTGAATTACTTCTAGGGAAAGCCTACTCAGATTGGGGCCATGTCAGTGATGCTGTAGCTGTTTATGATCAGCTCATATCTACTCACCCAAATGATTTTCGTGGATACTTAGCTAAGGCGATCATCCTAAAAGAAAACAAAAATATTGGTGATGCAGAAAGGATGTTCATACAAGCTAGGTTCTTTGCACCAGATAAAGCCAAAGCACTGGTAGACCGTTATTCAAGATGA 1056 0.4242 MWTTNMHAMSVRSGALFCFQINCCDSKQGRGFGENRIKTNKSDKGLVSQAPQSKGSSTKQSHPLSSQAPAPRLSSQVDGKSRNDFFDVDFEERLKAVRRSALEQKKAEDVKEFGAIDYDAPIPSDNKTIGLGTKIGVGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSKLSEEDKATLQEKPNDVDVFRLLGEVKYELKDYEGSVAAYKSSARVSKDIQFEVLRGLSNSLLASKKPEEAVQLLLAYRERLSSENLSKKSVSNPTDLQKLDPVQVELLLGKAYSDWGHVSDAVAVYDQLISTHPNDFRGYLAKAIILKENKNIGDAERMFIQARFFAPDKAKALVDRYSR 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aed2g0010 351 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 181 351 - -
Aed2g0010 351 MobiDBLite consensus disorder prediction 42 80 - -
Aed2g0010 351 ProSiteProfiles TPR repeat profile. 274 307 IPR019734 GO:0005515
Aed2g0010 351 SUPERFAMILY TPR-like 179 340 IPR011990 GO:0005515
Aed2g0010 351 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 181 351 - -
Aed2g0010 351 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 12 182 - -
Aed2g0010 351 MobiDBLite consensus disorder prediction 30 80 - -
Aed2g0010 351 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 12 182 - -
Aed2g0010 351 Gene3D Tetratricopeptide repeat domain 170 349 IPR011990 GO:0005515
Aed2g0010 351 SMART tpr_5 187 220 IPR019734 GO:0005515
Aed2g0010 351 SMART tpr_5 274 307 IPR019734 GO:0005515
Aed2g0010 351 SMART tpr_5 308 341 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aed2g0010 - - gmx:100790462 556.599